Seriola lalandi dorsalis (Yellowtail amberjack): 111663195
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Entry
111663195 CDS
T06058
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04115
p53 signaling pathway
slal04145
Phagosome
slal04148
Efferocytosis
slal04350
TGF-beta signaling pathway
slal04510
Focal adhesion
slal04512
ECM-receptor interaction
slal04518
Integrin signaling
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111663195
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111663195
04518 Integrin signaling
111663195
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111663195
04148 Efferocytosis
111663195
09143 Cell growth and death
04115 p53 signaling pathway
111663195
09144 Cellular community - eukaryotes
04510 Focal adhesion
111663195
09142 Cell motility
04820 Cytoskeleton in muscle cells
111663195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111663195
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
slal00536
]
111663195
Membrane trafficking [BR:
slal04131
]
Endocytosis
Phagocytosis
Opsonins
111663195
Glycosaminoglycan binding proteins [BR:
slal00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111663195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
VWC2L_2nd
EGF_3
TSP1_ADAMTS
EGF_CA
cEGF
TSP1_CCN
Laminin_G_3
Zn_ribbon_NUD
EGF
Motif
Other DBs
NCBI-GeneID:
111663195
NCBI-ProteinID:
XP_023273062
Ensembl:
ENSSLDG00000022074
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MMLCGIFLLVMLWSCEGARLAESRDDNSVYDLFDLARVNKRHHGVSLVKGADPYSPAYKV
LNADLIPPVPDSSFRDLLDSIQTERGFLLLVNLKQSKKSRGSLLTIEKTDGSGPIFEIIS
NGMNNTLDVVYSTMYQQQKVSIEDADLATGHWKNITLFVQDDRAQLFVGCEEINVSELDV
PIYKVLSQEVADSARLRIGKGSVKDRFMGVLQNVRFVFGTTLDAILRNKGCQSGATLTDV
MTLDNPVNGSSPAIRTDYTGHKAKDLLSVCGFSCEDIASMFKELKGLGVIVKNLKNDLEK
VSEASTIMIQNLNSGACYHNGIQYKDQDEWTMDSCTECTCQKSVTLCRKISCPLIPCVNA
TVPDGECCPRCGTPSDMAEDGWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCEGTSVQT
RDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCQGEGRQ
TEICQKSPCPIDGGWGPWSPWDTCTVTCGGGIQTRKRLCSDPVPKYGGKDCVGDATMSHV
CNKQECPVDGCLSNPCFPGAKCISFPDGSFRCGKCPLGYRGNGVICKDIDECKEVPDACH
THNAVHRCENTQPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCTPRNPCRDGSHNCNKN
ANCIYLGVYSESMFRCECRPGYAGNGRICGEDTDLDGWPNTDLLCVENATYHCKKDNCPN
LPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPREYNPAQYDADRDDIGDRCDNCVFE
ANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPLEH
NPDQIDSDSDLVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDN
DGIPDEKDNCRLAYNPDQKDSDGDGRGDLCQYDFDQDNVLDIHDVCPENFDISETDFRRF
QMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFINTDRDD
DYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRNAL
WHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRMMADSGNIFD
KTYAGGRLGLYVFSQEMVYFSDLKYECRDDK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatctttttgctggtgatgctttggagttgtgaaggcgcaagactg
gcagagagtcgagatgataacagtgtgtatgacttatttgatctggcccgagtcaacaag
agacaccacggagtgagtttggtgaaaggcgccgatccctacagccccgcatacaaagtc
ctgaacgcagacctgatcccccccgtccccgacagctccttcagggacctcctcgactcc
atccagactgagaggggcttcctcctcctggtcaacctgaagcagtccaagaaatccaga
ggcagccttttgaccatcgagaagactgatggatccggacccatcttcgagatcatttcc
aacggcatgaataacaccctggatgtggtgtactccaccatgtaccagcagcagaaagtc
tccatcgaggacgcagacttggccactggacactggaagaacatcacgctgttcgttcag
gatgaccgcgcgcagctttttgtcggctgtgaggagatcaacgtgtcagagctggacgtg
cccatctacaaagtgctgtcccaggaggtggcagacagcgccaggctcaggatcggaaag
ggatctgtgaaggacagatttatgggagtccttcagaatgtgcgctttgtctttgggacc
actcttgatgctatactgagaaataagggatgccagagcggagctaccttaactgatgtc
atgaccttggacaaccctgtcaacggctccagccctgccattagaactgattacaccggc
cacaaagccaaagatctgctgtctgtctgcggcttctcttgtgaggacatcgccagcatg
tttaaggagctcaagggactcggtgtgattgttaaaaacctgaagaatgaccttgagaaa
gtgtctgaggcgagcacaatcatgatacagaacctcaacagcggagcttgctaccacaac
ggcatccagtacaaggaccaagatgaatggaccatggacagctgcactgagtgcacctgc
cagaaatctgtcactttgtgtcgcaaaatctcctgccctctgatcccatgcgttaacgcc
accgtgcccgacggagagtgctgccctcgctgtggaacaccgagtgacatggccgaggat
ggatggtctccctggtctgaatggacccactgttcagtgacttgtggccgtggcatccag
cagcgcggacgctcctgtgaccgcatcaacagcaactgtgagggcacctctgtccagacc
cgtgactgctacccccaggaatgtgacaaacgcttcaaacaggatggtggctggagtcac
tggtctccctggtcatcatgctctgtgacctgtggtgagggggtcatcacccggatccgc
ctctgcaactcccccacaccccagatgggtggcaaggactgccagggagaaggacgtcaa
actgaaatctgccagaagtcaccttgtcctatcgatggaggctggggaccttggtcacca
tgggacacctgcactgttacctgtggtggaggaatccagacccgcaaacgtctctgctct
gaccccgttcccaaatacggtggaaaagattgcgttggtgatgccactatgtctcatgtg
tgcaacaaacaagagtgtcctgttgatggttgtctgtccaacccatgcttccctggcgct
aaatgcatcagcttccctgatggctctttcaggtgtggcaagtgtccacttggctatcgt
ggaaatggcgtcatctgcaaagacattgatgaatgtaaagaggttcctgatgcctgccac
actcataacgcagtccatcgctgtgagaatactcagcctggttacaactgtctgccttgc
cctgcacgtttctccggtcctcagcccttcggaagaggagtggaacaggcaactgctaaa
aaacaggtttgcacaccccgcaacccttgccgggatggtagccacaactgcaataaaaat
gcaaactgcatctacttaggcgtctactctgagtccatgttccgctgcgagtgcaggcca
ggatatgccggtaatggccgtatctgtggagaggacactgacctggatggatggcccaac
actgacctgctgtgtgtggagaatgctacctaccactgcaagaaggataactgtcccaac
ctccccaactctggtcaggaagatcatgacaaagatggcctgggtgatgaatgtgaccat
gatgatgacaatgatgggatccccgatgatagggacaactgtccaagagaatacaaccct
gcccagtacgacgcagacagggatgatattggcgaccgctgtgacaactgtgtgtttgag
gctaacaccgaccaaaccgacactgacaacaatggagagggtgatgcctgtgctgttgac
atcgatggcgatggcattctgaatgagaacgacaattgcccttatgtttacaatgtggac
cagagagatactgatagagatggcgtgggagaccactgtgacaactgccctctggagcac
aaccctgatcagatcgactctgactcagatctcgtaggagacaagtgcgacaacaaccag
gacattgacgaggacggtcaccagaacaacttggacaactgcccctacatccccaacgcc
aaccaggcagaccatgacaaagatggcaagggtgacgcctgcgaccacgacgatgacaat
gacggcattcccgatgaaaaagacaactgtcgactggcttataaccctgatcaaaaggac
tctgatggtgatggccgcggtgatctgtgccaatacgattttgaccaagacaatgttttg
gacatccatgacgtgtgtccagagaactttgacatcagcgaaacagacttccgcagattc
cagatggttcctctggaccccaagggtacctctcagattgaccccaactgggtggtccgg
catcagggcaaagagttggtgcagacagtcaactgtgatcccggcattgctgttgggttc
gatgagttcagtgctgtggatttcagtggaacattcttcatcaacacggacagagatgac
gattacgccgggttcgtgtttggctaccagtccagctcgcgcttctacacagtcatgtgg
aaacagatcacacagacctactggtcccacacacccacaagagctcaaggctactctggc
ctgtcaatcaaagtggtcaactccaccaccggccccggtgagcatctgaggaacgccctg
tggcacaccggagacaccccaggacaggtgcgcactctgtggcacgaccctaagaacatt
ggctggaaggacttcactgcctacaggtggcacctgacccacagacccaagactggactt
attagagtggtcatgtacgaaggcaagagaatgatggccgattctggaaacatctttgac
aagacatacgctggtgggcgactaggcttgtatgtcttctctcaggagatggtttacttc
tcagacctcaaatatgaatgcagagatgataaataa
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integrated database retrieval system
