Seriola lalandi dorsalis (Yellowtail amberjack): 111663195
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Entry
111663195 CDS
T06058
Name
(RefSeq) thrombospondin-1-like
KO
K16857
thrombospondin 1
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal04115
p53 signaling pathway
slal04145
Phagosome
slal04148
Efferocytosis
slal04350
TGF-beta signaling pathway
slal04510
Focal adhesion
slal04512
ECM-receptor interaction
slal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111663195
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111663195
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
111663195
04148 Efferocytosis
111663195
09143 Cell growth and death
04115 p53 signaling pathway
111663195
09144 Cellular community - eukaryotes
04510 Focal adhesion
111663195
09142 Cell motility
04820 Cytoskeleton in muscle cells
111663195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slal04131
]
111663195
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
slal00536
]
111663195
Membrane trafficking [BR:
slal04131
]
Endocytosis
Phagocytosis
Opsonins
111663195
Glycosaminoglycan binding proteins [BR:
slal00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111663195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
EGF_3
TSP1_ADAMTS
EGF_CA
cEGF
TSP1_CCN
zf-NADH-PPase
Laminin_G_3
EGF
Motif
Other DBs
NCBI-GeneID:
111663195
NCBI-ProteinID:
XP_023273062
Ensembl:
ENSSLDG00000022074
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MMLCGIFLLVMLWSCEGARLAESRDDNSVYDLFDLARVNKRHHGVSLVKGADPYSPAYKV
LNADLIPPVPDSSFRDLLDSIQTERGFLLLVNLKQSKKSRGSLLTIEKTDGSGPIFEIIS
NGMNNTLDVVYSTMYQQQKVSIEDADLATGHWKNITLFVQDDRAQLFVGCEEINVSELDV
PIYKVLSQEVADSARLRIGKGSVKDRFMGVLQNVRFVFGTTLDAILRNKGCQSGATLTDV
MTLDNPVNGSSPAIRTDYTGHKAKDLLSVCGFSCEDIASMFKELKGLGVIVKNLKNDLEK
VSEASTIMIQNLNSGACYHNGIQYKDQDEWTMDSCTECTCQKSVTLCRKISCPLIPCVNA
TVPDGECCPRCGTPSDMAEDGWSPWSEWTHCSVTCGRGIQQRGRSCDRINSNCEGTSVQT
RDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGKDCQGEGRQ
TEICQKSPCPIDGGWGPWSPWDTCTVTCGGGIQTRKRLCSDPVPKYGGKDCVGDATMSHV
CNKQECPVDGCLSNPCFPGAKCISFPDGSFRCGKCPLGYRGNGVICKDIDECKEVPDACH
THNAVHRCENTQPGYNCLPCPARFSGPQPFGRGVEQATAKKQVCTPRNPCRDGSHNCNKN
ANCIYLGVYSESMFRCECRPGYAGNGRICGEDTDLDGWPNTDLLCVENATYHCKKDNCPN
LPNSGQEDHDKDGLGDECDHDDDNDGIPDDRDNCPREYNPAQYDADRDDIGDRCDNCVFE
ANTDQTDTDNNGEGDACAVDIDGDGILNENDNCPYVYNVDQRDTDRDGVGDHCDNCPLEH
NPDQIDSDSDLVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDN
DGIPDEKDNCRLAYNPDQKDSDGDGRGDLCQYDFDQDNVLDIHDVCPENFDISETDFRRF
QMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFSAVDFSGTFFINTDRDD
DYAGFVFGYQSSSRFYTVMWKQITQTYWSHTPTRAQGYSGLSIKVVNSTTGPGEHLRNAL
WHTGDTPGQVRTLWHDPKNIGWKDFTAYRWHLTHRPKTGLIRVVMYEGKRMMADSGNIFD
KTYAGGRLGLYVFSQEMVYFSDLKYECRDDK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgtggcatctttttgctggtgatgctttggagttgtgaaggcgcaagactg
gcagagagtcgagatgataacagtgtgtatgacttatttgatctggcccgagtcaacaag
agacaccacggagtgagtttggtgaaaggcgccgatccctacagccccgcatacaaagtc
ctgaacgcagacctgatcccccccgtccccgacagctccttcagggacctcctcgactcc
atccagactgagaggggcttcctcctcctggtcaacctgaagcagtccaagaaatccaga
ggcagccttttgaccatcgagaagactgatggatccggacccatcttcgagatcatttcc
aacggcatgaataacaccctggatgtggtgtactccaccatgtaccagcagcagaaagtc
tccatcgaggacgcagacttggccactggacactggaagaacatcacgctgttcgttcag
gatgaccgcgcgcagctttttgtcggctgtgaggagatcaacgtgtcagagctggacgtg
cccatctacaaagtgctgtcccaggaggtggcagacagcgccaggctcaggatcggaaag
ggatctgtgaaggacagatttatgggagtccttcagaatgtgcgctttgtctttgggacc
actcttgatgctatactgagaaataagggatgccagagcggagctaccttaactgatgtc
atgaccttggacaaccctgtcaacggctccagccctgccattagaactgattacaccggc
cacaaagccaaagatctgctgtctgtctgcggcttctcttgtgaggacatcgccagcatg
tttaaggagctcaagggactcggtgtgattgttaaaaacctgaagaatgaccttgagaaa
gtgtctgaggcgagcacaatcatgatacagaacctcaacagcggagcttgctaccacaac
ggcatccagtacaaggaccaagatgaatggaccatggacagctgcactgagtgcacctgc
cagaaatctgtcactttgtgtcgcaaaatctcctgccctctgatcccatgcgttaacgcc
accgtgcccgacggagagtgctgccctcgctgtggaacaccgagtgacatggccgaggat
ggatggtctccctggtctgaatggacccactgttcagtgacttgtggccgtggcatccag
cagcgcggacgctcctgtgaccgcatcaacagcaactgtgagggcacctctgtccagacc
cgtgactgctacccccaggaatgtgacaaacgcttcaaacaggatggtggctggagtcac
tggtctccctggtcatcatgctctgtgacctgtggtgagggggtcatcacccggatccgc
ctctgcaactcccccacaccccagatgggtggcaaggactgccagggagaaggacgtcaa
actgaaatctgccagaagtcaccttgtcctatcgatggaggctggggaccttggtcacca
tgggacacctgcactgttacctgtggtggaggaatccagacccgcaaacgtctctgctct
gaccccgttcccaaatacggtggaaaagattgcgttggtgatgccactatgtctcatgtg
tgcaacaaacaagagtgtcctgttgatggttgtctgtccaacccatgcttccctggcgct
aaatgcatcagcttccctgatggctctttcaggtgtggcaagtgtccacttggctatcgt
ggaaatggcgtcatctgcaaagacattgatgaatgtaaagaggttcctgatgcctgccac
actcataacgcagtccatcgctgtgagaatactcagcctggttacaactgtctgccttgc
cctgcacgtttctccggtcctcagcccttcggaagaggagtggaacaggcaactgctaaa
aaacaggtttgcacaccccgcaacccttgccgggatggtagccacaactgcaataaaaat
gcaaactgcatctacttaggcgtctactctgagtccatgttccgctgcgagtgcaggcca
ggatatgccggtaatggccgtatctgtggagaggacactgacctggatggatggcccaac
actgacctgctgtgtgtggagaatgctacctaccactgcaagaaggataactgtcccaac
ctccccaactctggtcaggaagatcatgacaaagatggcctgggtgatgaatgtgaccat
gatgatgacaatgatgggatccccgatgatagggacaactgtccaagagaatacaaccct
gcccagtacgacgcagacagggatgatattggcgaccgctgtgacaactgtgtgtttgag
gctaacaccgaccaaaccgacactgacaacaatggagagggtgatgcctgtgctgttgac
atcgatggcgatggcattctgaatgagaacgacaattgcccttatgtttacaatgtggac
cagagagatactgatagagatggcgtgggagaccactgtgacaactgccctctggagcac
aaccctgatcagatcgactctgactcagatctcgtaggagacaagtgcgacaacaaccag
gacattgacgaggacggtcaccagaacaacttggacaactgcccctacatccccaacgcc
aaccaggcagaccatgacaaagatggcaagggtgacgcctgcgaccacgacgatgacaat
gacggcattcccgatgaaaaagacaactgtcgactggcttataaccctgatcaaaaggac
tctgatggtgatggccgcggtgatctgtgccaatacgattttgaccaagacaatgttttg
gacatccatgacgtgtgtccagagaactttgacatcagcgaaacagacttccgcagattc
cagatggttcctctggaccccaagggtacctctcagattgaccccaactgggtggtccgg
catcagggcaaagagttggtgcagacagtcaactgtgatcccggcattgctgttgggttc
gatgagttcagtgctgtggatttcagtggaacattcttcatcaacacggacagagatgac
gattacgccgggttcgtgtttggctaccagtccagctcgcgcttctacacagtcatgtgg
aaacagatcacacagacctactggtcccacacacccacaagagctcaaggctactctggc
ctgtcaatcaaagtggtcaactccaccaccggccccggtgagcatctgaggaacgccctg
tggcacaccggagacaccccaggacaggtgcgcactctgtggcacgaccctaagaacatt
ggctggaaggacttcactgcctacaggtggcacctgacccacagacccaagactggactt
attagagtggtcatgtacgaaggcaagagaatgatggccgattctggaaacatctttgac
aagacatacgctggtgggcgactaggcttgtatgtcttctctcaggagatggtttacttc
tcagacctcaaatatgaatgcagagatgataaataa
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integrated database retrieval system
