Seriola lalandi dorsalis (Yellowtail amberjack): 111665400
Help
Entry
111665400 CDS
T06058
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
slal
Seriola lalandi dorsalis (Yellowtail amberjack)
Brite
KEGG Orthology (KO) [BR:
slal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
slal01009
]
111665400
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
slal04040
]
111665400
Protein phosphatases and associated proteins [BR:
slal01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111665400
Ion channels [BR:
slal04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111665400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_5
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
111665400
NCBI-ProteinID:
XP_023276157
Ensembl:
ENSSLDG00000007420
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MNPMTQLYYKKATYSPYRDRIPLQIVRAEVELSAEERAYLTAVEKGDYAGVKHALREAEV
YYNMDVNCLDPLGRSALLIAIENENLEIMELLLDHGIHTGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEF
RQEYEELSQQCKRFAKDLLDQARSSRELETILNHRDNDQSEELDPRQCHDLAKLKLAIKY
HQKEFVAQPNCQQLLATLWYDGFPGWRRRHWVVKLVTCFIIGLLFPVFSLIYLLAPKSAL
GRFIKKPFIKFICHTASYLTFLFLLLLASQHIARTNLHMQGPPPTIVEWMILPWVLGFIW
AEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATISLKIVAYVKYNSSRPREEWEMWHPTL
IAEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETTASEEPSNCKGIRCERQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIIPSPKSIWYLLMWLHNKLCRRGQPPGEDTHKCENLREFTERHADSLIQNQHYQ
EVIRSLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGNRRPPRRHYSSS
SETTREDGAMASEDDSESGDGGGGGGVQRSKSVTFMTPLEDDTGPAPALGVSALVRSISG
MTQIERGGEGKEGELEEGIGWGEEEEEEEGKPKSNGLKTTVIPPSSTTVLPSPSSSFSSS
FSSSLARTRSRLQRLSSPRAKTDSFKRLSYLFSRSKRKAPPMPLSLQSPPSYTISDGLLR
PLGSHSHSDFGLSDVTRSETHLNEVGRSVDISNPSFSPRRTNGRDSLLTLPLPPPCPCQS
LHCASNMSESSSRLLDSSEDVFQGGGVGGAGEGRVDGGGGRGGVMMMGGWLRCPQVARK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatgacacagttgtactacaagaaggcgacatattcgccgtaccgcgaccgc
atcccgcttcagatcgtccgggctgaggtggagctgtctgcggaggagagggcctatctc
accgccgtggagaaaggtgactatgcaggcgtcaagcacgccctgcgcgaggcggaggtc
tactacaacatggacgtgaactgtctggacccgctgggccgcagcgcgctcctcatcgcc
atcgagaacgagaacctggagatcatggagctccttctcgaccacggcatccacacgggc
gacgccctgctctacgccatcaggaaggaggtggtgggcgccgtcgagctgctgctgtca
cacaggaggcccagcggcgagaaacaggttccttcgctgatgatggacagtcagttttca
gagttcaccccagacataactcccatcatgctcgctgctcacaccaacaactacgagatc
atcaagctgctcgtccagcggaaggtcaccatccccagaccgcaccagatccgatgcgac
tgtgtcgagtgcgtctccagttcggaggttgacagcctgcggcattcgcggtcccgactc
aacatctacaaggctctggcctcgccgtccctcatcgcgctgtcgagcgaagaccccatc
ctcaccgccttcagactgggctgggaactcaaggagctcagcaaggtggagaacgagttt
cgtcaggagtacgaggagctctcacagcagtgcaaacgcttcgccaaagacctcctggac
caggccaggagttcaagagagctggagaccatcctgaaccacagagacaacgaccagagc
gaggaactggaccccagacagtgccacgacctggccaagctcaaactggccatcaaatac
caccaaaaagagtttgtggcccagccgaactgccagcagctcctggccacactgtggtac
gacggcttcccgggctggaggagacgacactgggtggtcaaactggtcacctgcttcatc
atcggactcctgtttcctgtcttctcactgatctacctgttggcgccaaagagcgctctg
ggacgcttcatcaagaagcccttcatcaagttcatctgtcacacggcgtcctacctgacc
ttcctcttcctgctgctgctggcgtcgcagcacatcgcccggaccaacctccacatgcag
gggcccccacccaccatcgtggagtggatgattctcccatgggtgctggggttcatctgg
gcagagattaaagagatgtgggacgggggattcacagagtacatccacgactggtggaac
ctgatggacttcgccatgaactccctttacctggccaccatatcactgaagatagtggcc
tacgtgaagtataactcctctcgtcccagggaggagtgggagatgtggcacccgacgctg
atcgccgaagctctgttcgccatcgccaacatcttcagctcgctcagactcatctccctc
ttcaccgcaaactcccacctcgggcccctgcagatttcactgggcaggatgctgctggac
atcctcaagtttctcttcatctactgtctggtcctgctggcgtttgccaacggtctgaac
cagctgtatttctactacgagaccacggcgtcggaggaacccagcaactgcaagggcatc
cgctgcgagaggcagaacaacgccttctcaacgttgtttgagaccctccagtctctgttc
tggtcgatattcgggctcttgaacttgtacgtcaccaacgtgaaagcccggcacgagttc
acggagttcgtgggggcgaccatgttcgggacgtacaacgtcatctcgctggtggtgctg
ctcaacatgctgatcgccatgatgaacaactcctaccagctgatcgccgaccacgccgac
atcgagtggaagttcgctcgcaccaagctgtggatgagttacttcgacgagggcggcacg
ctgccgcctccgttcaacatcatcccgagccccaagtccatctggtacctgctcatgtgg
ctgcacaacaagctgtgtaggaggggccagccgcccggggaggacacgcacaaatgtgaa
aacctccgagagttcacggaacgtcacgccgacagtctgatacagaaccagcattaccag
gaagtgatccggagcctggtgaagaggtacgtggcggccatgattcgcagcgccaagacc
gacgagggactgacggaggaaaactttaaggagttgaagcaagacatctccagttttcgc
tacgaggtcctggatctcctcggcaaccggcgtcctccccggcgacactactcttcctcc
agcgagacaacgagagaggatggcgccatggcctcggaggatgacagcgaatcgggcgat
ggcggcggaggaggcggagtccaaaggtcaaagagcgtgaccttcatgaccccgctggag
gacgacacggggccggcgcccgcgctcggcgtctccgccctggtgcgctccatttcagga
atgacccagatagaaagagggggagaggggaaggagggggagctggaggagggcatcgga
tggggggaagaggaggaggaagaggaggggaaaccaaagagcaacgggctgaagacgacc
gtcatccctccgtcctccaccaccgtcctgccctcgccatcttcatccttctcctcgtcg
ttctcatcgtcactcgctcgcacgaggagtcgcctgcagcgcctctcgtctccgagggcg
aaaacggactctttcaaacgcctctcctacctgttctcccgctccaaacgcaaagccccg
cccatgcctctttccctccagtccccgccctcctacaccatctctgacgggttgctccgc
cccctggggagccacagccactccgacttcggactcagtgacgtgaccagaagcgagact
cacctgaacgaggtgggccgctcagtcgacatcagtaacccctcgttctcgccgcggagg
acgaacgggcgggactcactcctgacgctgcccctcccgcccccgtgcccctgccaatcc
ctgcactgtgcttccaacatgtccgagtccagctctcgcctcctggactccagcgaggac
gttttccagggcggaggcgtgggaggagcgggcgagggccgtgtggacggaggaggggga
agaggaggggtgatgatgatgggcggctggctgcgctgcccccaggtggccaggaaataa
DBGET
integrated database retrieval system
