KEGG   Seriola lalandi dorsalis (Yellowtail amberjack): 111673001
Entry
111673001         CDS       T06058                                 
Symbol
actb
Name
(RefSeq) actin, cytoplasmic 1
  KO
K05692  actin beta/gamma 1
Organism
slal  Seriola lalandi dorsalis (Yellowtail amberjack)
Pathway
slal03082  ATP-dependent chromatin remodeling
slal04145  Phagosome
slal04210  Apoptosis
slal04510  Focal adhesion
slal04520  Adherens junction
slal04530  Tight junction
slal04810  Regulation of actin cytoskeleton
slal04814  Motor proteins
slal04820  Cytoskeleton in muscle cells
slal05100  Bacterial invasion of epithelial cells
slal05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:slal00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111673001 (actb)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    111673001 (actb)
  09143 Cell growth and death
   04210 Apoptosis
    111673001 (actb)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    111673001 (actb)
   04520 Adherens junction
    111673001 (actb)
   04530 Tight junction
    111673001 (actb)
  09142 Cell motility
   04814 Motor proteins
    111673001 (actb)
   04820 Cytoskeleton in muscle cells
    111673001 (actb)
   04810 Regulation of actin cytoskeleton
    111673001 (actb)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    111673001 (actb)
   05100 Bacterial invasion of epithelial cells
    111673001 (actb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slal03021]
    111673001 (actb)
   03019 Messenger RNA biogenesis [BR:slal03019]
    111673001 (actb)
   03036 Chromosome and associated proteins [BR:slal03036]
    111673001 (actb)
   03029 Mitochondrial biogenesis [BR:slal03029]
    111673001 (actb)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:slal04812]
    111673001 (actb)
   04147 Exosome [BR:slal04147]
    111673001 (actb)
Transcription machinery [BR:slal03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     111673001 (actb)
Messenger RNA biogenesis [BR:slal03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     111673001 (actb)
Chromosome and associated proteins [BR:slal03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     111673001 (actb)
    NuA4 complex
     111673001 (actb)
  Chromatin remodeling factors
   BAF complex
    111673001 (actb)
   PBAF complex
    111673001 (actb)
   GBAF(ncBAF) complex
    111673001 (actb)
   SWR1 complex
    111673001 (actb)
Mitochondrial biogenesis [BR:slal03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    111673001 (actb)
Cytoskeleton proteins [BR:slal04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     111673001 (actb)
Exosome [BR:slal04147]
 Exosomal proteins
  Proteins found in most exosomes
   111673001 (actb)
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 111673001
NCBI-ProteinID: XP_023286381
Ensembl: ENSSLDG00000014332
LinkDB
Position
Unknown
AA seq 375 aa
MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPTTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggatgacgaaattgcagccctcgttgttgacaacggatctggtatgtgcaaagctggc
tttgcaggagatgatgctccacgtgctgtgttcccctccatcgttggacgtcccaggcat
cagggtgtgatggttggtatgggccagaaagacagctacgttggtgacgaggcacagagc
aaaaggggaatcctgactctgaagtaccccattgagcacggtattgtcaccaactgggat
gacatggagaagatctggcatcacaccttctacaacgagctgagagttgcccctgaggag
cacccagtcctgctcacagaggcccccctgaaccctaaggccaacagggaaaagatgacc
cagatcatgtttgagaccttcaacacccctgccatgtatgtggccatccaggctgtgctg
tccctgtacgcttcaggtcgtaccactggtattgtcatggactctggtgatggtgtgacc
cacacagtgcccatctatgaaggctacgccctgccccacgccatcctgaggttggacctg
gctggcagagacctcacagactacctcatgaagatcctgactgagaggggctacagcttc
accaccacagctgagcgtgagattgtgcgtgatattaaggagaagctgtgttacgttgca
ctggactttgagcaagaaatgggaactgctgcctcctcctcatccctggagaagagctac
gagctgcctgacggacaggtcatcaccattggaaatgagaggttccgttgccctgaggct
ctcttccagccctctttccttggtatggagtcttgtggtatccatgaaactaccttcaac
agcatcatgaagtgtgatgtggacatccgtaaggacctgtacgccaacactgtgctgtct
ggtggtaccaccatgtaccctggcattgctgaccgtatgcagaaggaaatcactgccctg
gcacccactaccatgaagattaagatcattgctcccccagagaggaagtactctgtatgg
atcggagggtccatcctggcttccctgtccaccttccagcagatgtggatcagcaagcag
gagtatgatgagtctggccccagcattgtccacaggaagtgcttctaa

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