Sphingomonas lacunae: GV829_02680
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Entry
GV829_02680 CDS
T07071
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
slan
Sphingomonas lacunae
Pathway
slan01501
beta-Lactam resistance
slan01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GV829_02680
01503 Cationic antimicrobial peptide (CAMP) resistance
GV829_02680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slan02000
]
GV829_02680
01504 Antimicrobial resistance genes [BR:
slan01504
]
GV829_02680
Transporters [BR:
slan02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GV829_02680
Antimicrobial resistance genes [BR:
slan01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GV829_02680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF2798
Motif
Other DBs
NCBI-ProteinID:
QJQ31488
UniProt:
A0A6M4AR12
LinkDB
All DBs
Position
575793..578906
Genome browser
AA seq
1037 aa
AA seq
DB search
MDFSKISAWCIRNPVPPLVLFVALLFAGVLSFNRMSVNDSPDVDFPAAQIVIAQPGAAPS
EMETQVTILVEAAVRGVNGIEEINSSVREGSSSTFVQFAIGTPIDRAVNDIRDAISNIRG
DLPEGILEPQVARVDVTGGALAYYSAEATDMTLEELSWYVDNTVAKRIRAIPGVAAVERG
GGVDREIRVILNPAELQSQGLTASQVNAQLRQLNINAAGGRAEIGGTEQSVRVLGNAADA
YALSQMDIAVGNRTIKLADIADVRDGYAEQRTRSLMDGREVLSFGITRAKGASDVEVYDE
VQQVLNDLREKNPKVSYRELFTSVNYTKDQFKSAMRAMIEGAILAVIVVFWFLRDWRATI
ISAIAIPLSAIPAFFFMDLLGFSLNFLSLLALSLVAGVLVDDAIVEIENIVRHMRMGKTA
YQASIDAADEIGLAVLATTMSIVAVFLPVGFMPGFSGQFFKNFGFTVVAAVLVSLAVARM
ITPMLAAYFLKSHGSASHGEGRAMDWYTSTLRWTLINRWKTMGVGILALVMTVLTFSGVP
GLIKPIPFAFQPPQDNDFSQIRIIMTPGTTLQQTEQVTRRVYDMISKAPDVKSAFADINV
GNANIFLTLKDDRSMKSVEFERSWADRLNAVPDARVSFQSQSQGGPGNTGRDITITLGGD
NSDVLNATASQIVTEMQQRLSDKLVAPRTNADMKRPELVITPRRQLASDLGVSTAAMSQA
IRIATLGEIEQNAAKFSLNDRQIPIAVQLGEDSRRSIANIENLPVPTSNGGSVPLKLVAD
IRFGAGPVSIQRTNQTRRVSLGADLAPGLVSGDVMPLIEELPTMKNLPQGVTRLTLGEAK
WQAELLVNFIIALVTGILLVFATLVLLYKRLLPPLVNMGSLALAPLGGAIALRLTGDAVS
MPVLIGMLLLFGIVAKNSILLVDFALEEMSKGIDKFEAILDAGHKRAQPIVMTTVAMVAG
MIPVALSLDGDGSFRAPMGITVIGGLIISTLLTLLIVPAGFSLAIGAEQRLGPWLRRKLL
TYRPGDEDRPVSPQPAE
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggatttcagcaagatttcagcctggtgcattcgcaatccggtgcccccgctggtgctg
tttgtcgcgctactgtttgccggcgtgctctcgttcaaccggatgagcgtcaacgattct
cccgatgttgattttcctgcggcgcagatcgtcattgcgcagccaggcgcagccccgagc
gagatggagacgcaggtcaccatcctggtagaggcggccgtgcgtggggtgaatggtatt
gaggaaatcaactcctcggtgcgcgaaggctcttcctccacttttgtccaattcgcgatt
ggcacgcccattgaccgcgcggtcaatgacatacgtgacgccatatcgaacatccgcggc
gacctacccgaggggatcctcgaaccccaggtggcgcgtgttgatgtcaccggcggcgcg
ctggcatattattcagccgaagccaccgacatgacgctggaagagctcagctggtatgtc
gacaataccgtggccaagcgaatccgggccattccaggcgtcgccgcagttgagcggggc
ggtggcgtcgaccgcgagataagggtgatattgaaccccgcagagttgcaatcacagggg
ctgaccgcttcccaggtcaatgcccagctccgccagctcaacatcaatgcagccggaggc
cgtgcagagattggcggcaccgagcaatcggttcgcgtcttgggcaatgcggccgacgcc
tatgccctgtcccagatggacatcgcggtgggcaaccgcacgatcaaactggccgacatc
gccgatgtccgcgacggttatgccgaacaacgcacacgctcgctcatggacgggcgggaa
gtgctcagctttggcatcacccgtgccaagggggcatccgacgtcgaggtctatgacgag
gtgcagcaagtcctcaacgacctgcgcgagaagaaccccaaagtcagctaccgtgagttg
ttcaccagcgtcaactataccaaggaccagttcaaatccgccatgcgggcgatgatcgaa
ggcgccatcctcgccgtgatcgtcgtcttctggttcctgcgggactggcgcgcgacgatc
atcagcgccattgccatccccctctccgccatccctgcctttttcttcatggacctgttg
ggcttttcgctcaacttcctgtcgctgttggccctcagtctggtggccggtgtgctggtc
gatgacgcaatcgtggaaatcgagaatatcgtccgtcatatgcgcatgggcaaaaccgcc
tatcaggcatcaatcgacgccgccgacgagattggcctggccgtgctcgcgacgaccatg
tcgatcgtcgcggtcttcctgccggtcggattcatgcccggattttcaggccaattcttc
aaaaatttcggctttaccgtcgttgcggccgtgctcgtttcactggcggtcgcgcgcatg
attacgcccatgctagcggcctatttcctgaaaagtcacggcagcgcgagccatggcgaa
gggcgtgccatggattggtacacatcgaccctgcgctggacgctgatcaaccggtggaag
acgatgggtgtgggcattctggcccttgtaatgacggtgctgaccttttccggcgttccc
ggcctgatcaagccgatcccctttgccttccagccgccgcaagacaatgatttcagtcag
atccgtatcataatgacgccgggaacgacgctgcagcaaaccgaacaggttacccgtcgc
gtctatgacatgatcagcaaggccccggatgtgaagtcagcctttgccgacatcaacgtc
ggcaacgccaacatcttcctgactctcaaggacgaccgctcgatgaagagcgtggagttt
gagcgcagctgggcagatcgtctcaacgccgtgccggacgcccgggtcagtttccagtcc
cagtcccaaggcggaccgggcaacaccggacgcgatatcaccatcaccttgggcggtgac
aatagcgacgtgctcaatgccacagcatcgcagattgtcaccgaaatgcagcagcgcttg
tctgacaagctggttgcaccgcgcacaaacgccgacatgaagcgaccggagctggttata
acaccgcgccgccagctggcgtctgatctcggcgtttcaaccgccgcgatgagccaggcg
atccgcatcgccactttgggcgaaattgaacagaatgccgccaaattttcactgaacgac
cggcaaattccgattgccgtccaactgggtgaggattcgcgccgcagcatcgccaatatc
gaaaatctgccggtcccaacctcaaatggcggctccgtccctctcaagctcgtcgccgac
atccgttttggcgccggtccagtgtcgattcagcgcactaatcagacacgtcgtgtcagt
ctgggagccgacctcgcccctggcctcgtcagcggcgacgtgatgccattgatcgaagaa
ttgccgacaatgaagaatttgccgcagggcgtgacccgactgactctgggcgaggccaaa
tggcaggcggaattgttggtcaatttcatcattgcgctcgtcaccggtatccttttggtg
ttcgccactctggtactgctctacaagcggctgctgccaccgttggtcaacatgggttcg
ttggcgctcgctccgctcggcggcgccatcgcgctgagactgaccggtgatgccgtatcg
atgccggtgcttatcggcatgctgctgctatttggcattgtcgcgaaaaactcgatcctg
ctggtcgacttcgcattggaggaaatgtcaaagggcatcgacaagttcgaagccattctt
gatgccggtcacaagcgcgcccagccgattgtcatgaccaccgtggcaatggtcgccggc
atgatcccggttgccctgagcctcgatggtgacggcagtttccgagcaccaatgggcatc
accgtgatcggtggcctgatcatctccaccctgctgaccttgcttattgttcctgcggga
ttcagtctggcgatcggcgcggaacagcggctcgggccttggctgcggcgcaaactgctg
acctatcgccctggcgatgaggatcggcccgtttcgccgcaaccggcggagtga
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