Sphingomonas lacunae: GV829_14195
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Entry
GV829_14195 CDS
T07071
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
slan
Sphingomonas lacunae
Pathway
slan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GV829_14195 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slan03400
]
GV829_14195 (nth)
Enzymes [BR:
slan01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GV829_14195 (nth)
DNA repair and recombination proteins [BR:
slan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GV829_14195 (nth)
Prokaryotic type
GV829_14195 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QJQ33440
UniProt:
A0A6M4AYK7
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All DBs
Position
2966300..2966959
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AA seq
219 aa
AA seq
DB search
MKRDTIFSFFATLAELDPHPVTELEFGNTYQLLVAVVLSAQATDVGVNKATRRLFAEVTH
PAQMVALGEDGLKQHIKTIGLFNAKAKNVIALSEALIRDHGGEVPADRDALEALPGVGRK
TANVVMNCAFGAETFAVDTHVFRVSNRTRLAPGKTVQAVEKALEKKVPAPFRVHAHHWLI
LLGRYTCKARTPECWHCPVVESCGFKAKVIEPPKGRKPA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgataccatcttctctttctttgccacactcgccgaactcgacccgcatccg
gtgaccgagctggaattcggcaacacataccaactgcttgttgccgtggtcctctcggcc
caggccaccgatgtcggtgtcaacaaggccacccgccgactattcgcggaagttacccac
cccgcgcagatggtcgcgttgggggaggatggcctcaaacagcacatcaagaccattggc
ctgttcaatgctaaggcgaagaatgtcatcgccctctccgaagcgctgatccgcgatcat
ggcggcgaggttcctgccgaccgtgacgcgctcgaagccttgcccggcgtgggtcgcaag
accgccaatgtcgtgatgaactgcgcattcggcgcggagacctttgcggtcgacacccat
gtcttcagagtcagcaaccgcacccggctggcccccggaaaaaccgtccaggccgttgaa
aaggcgctggaaaagaaagtgcccgcgccgttccgggtccatgcccaccactggctgatc
ctgctcggccgctatacctgcaaggcgcggacgcccgaatgctggcattgcccggtggtc
gaaagctgcggcttcaaggccaaggtgatcgaaccgccgaagggacgcaagcccgcctga
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