KEGG   Streptomyces laurentii: SLA_5384
Entry
SLA_5384          CDS       T05205                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
slau  Streptomyces laurentii
Pathway
slau03030  DNA replication
slau03410  Base excision repair
slau03420  Nucleotide excision repair
slau03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:slau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SLA_5384
   03410 Base excision repair
    SLA_5384
   03420 Nucleotide excision repair
    SLA_5384
   03430 Mismatch repair
    SLA_5384
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slau03032]
    SLA_5384
   03400 DNA repair and recombination proteins [BR:slau03400]
    SLA_5384
Enzymes [BR:slau01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     SLA_5384
DNA replication proteins [BR:slau03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     SLA_5384
DNA repair and recombination proteins [BR:slau03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     SLA_5384
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SLA_5384
   MMR (mismatch excision repair)
    DNA ligase
     SLA_5384
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SLA_5384
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Nlig-Ia HHH_5 HHH Zn_ribbon_TFIIB
Other DBs
NCBI-ProteinID: BAU86265
UniProt: A0A160P5M0
LinkDB
Position
5609694..5611871
AA seq 725 aa
MTVEQGAPAEAREKHAELAEQVEEHRFRYYVKDQPVVSDAEFDRLLRSLEELEADYPDLR
TPDSPTQKVSGSYETEFTAVEHRERMLSLDNAFDDAELAAWAERVAKDVGTGAYHFLCEL
KVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIADIPHRLSGERVPDLVEIRGEV
YFPMAAFEALNARLVEAGDKPFANPRNAAAGSLRQKDPKVTATRPLHMVVHGIGARDGLE
IARLSDAYALLHEWGLPTARHNKVVDSLDGVREFIAYFGENRHSVEHEIDGVVVKLDEIP
LQGRLGSTARAPRWAIAWKYAPEEVNSKLIDIKVGVGRTGRVTPYAQVEPVTVAGSEVEF
ATLHNQDVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGTEREFVMPAECPECGTAL
KPMKEGDIDLRCPNARTCPAQLRERLAFLVGRSSLDIENFGMVAAAALTRPLEPAEPPLA
DEGDLFDLTIEQLLPIRAYVLDPDSGLPKRDPKTGEEKIVSVFANQKGEPKKNALAMLKH
IEEAKTRPLARFLNGLSIRHVGPVAAEALAREFRSLERIEQATEQELAEVDGVGGIIAAA
VKRWFEEDWHREIVRKWRAAGVALEDEGAGEEQGPRPLDGLTVVVTGTLKDYTRDGAKES
LQARGAKVTGSVSKKTAFVVVGDSPGSKYDKAMQLKVPVLDEQGFVVLLEQGPEAAREAA
LPVAE
NT seq 2178 nt   +upstreamnt  +downstreamnt
gtgacagtcgaacagggggcccccgccgaggcgcgggagaagcacgccgagctggcggag
caggtcgaggagcaccgcttccggtactacgtgaaggaccagccggtcgtcagcgacgcg
gagttcgaccggctcctgcggtcgctggaggagctggaggcggactacccggatctgagg
acgccggattcgccgacccagaaggtgtccggctcgtacgagacggagttcaccgccgtc
gagcaccgcgagcggatgctgtccctggacaacgcgttcgacgacgcggagctggccgcc
tgggccgagcgggtcgcgaaggacgtcggcacgggcgcgtaccacttcctgtgcgagctg
aaggtcgacggactcgccgtgaacctcacgtacgagcacgggcggctgacccgtgcggcg
acccgcggcgacggccgtacgggcgaggacatcacgcccaacgtgcgcacgatcgcggac
atcccgcaccggctgtccggcgagcgcgtcccggacctggtggagatccgcggcgaggtc
tacttcccgatggccgccttcgaggcgctgaacgcgcgcctggtggaggccggtgacaag
ccgttcgccaacccgcgcaacgcggcggcgggttcgctgcgccagaaggacccgaaggtg
acggcgacccggccgctgcacatggtggtccacggcatcggcgcccgcgacggcctggag
atcgcccgcctgtcggacgcgtacgcgctgctgcacgagtggggcctgcccaccgcccgg
cacaacaaggtggtcgactccctcgacggcgtacgggagttcatcgcgtacttcggcgag
aaccggcactccgtcgagcacgagatcgacggtgtcgtcgtcaagctcgacgagatcccg
ctccagggccggctcggctccaccgcgcgcgccccgcgctgggcgatcgcgtggaagtac
gcgccggaggaggtcaacagcaagctgatcgacatcaaggtcggcgtcggccgcacgggg
cgcgtcacgccgtacgcgcaggtggagccggtgacggtggccggttccgaggtcgagttc
gccaccctgcacaaccaggacgtggtgaaggccaagggtgtgctgatcggcgacacggtc
gtgctgcgcaaggccggcgacgtcattccggagatcctcggcccggtggtggacctgcgg
gacggcaccgagcgggagttcgtgatgccggccgagtgccccgagtgcggcacggcgctg
aagccgatgaaggaaggcgacatcgatctgcgctgccccaacgcgcggacctgtcccgcc
cagctgcgcgagcggctggccttcctcgtcggccggtcgtccctcgacatcgagaacttc
ggcatggtcgcggcggcggcgctcacccgcccgctggagccggccgagccgccgctggcc
gacgagggcgacctgttcgacctgacgatcgagcagctgctgccgatccgcgcgtacgtc
ctcgacccggacagcgggctgcccaagcgggacccgaagaccggcgaggagaagatcgtc
tcggtcttcgccaaccagaagggcgagccgaagaagaacgcgctggccatgctgaagcac
atcgaggaggccaagacccggccgctggcccgcttcctcaacggcctgtcgatccgtcac
gtggggccggtcgcggccgaggcgctggcgcgcgagttccgctccctggagcggatcgag
caggccacggagcaggagctggcggaggtcgacggcgtcggcgggatcatcgccgccgcc
gtgaagcgctggttcgaggaggactggcaccgcgagatcgtgcgcaagtggcgcgcggcc
ggggtcgccctggaggacgagggcgcgggggaggagcagggtccccgtccgctcgacggg
ctgaccgtggtcgtcaccggcaccctgaaggactacaccagggatggcgcaaaagaatcg
ctccaagcgcgaggagcgaaggtgaccggttccgtttcaaagaagaccgcattcgtggtc
gtcggtgacagcccgggttccaagtacgacaaggcgatgcagctgaaagttccggttctg
gacgaacagggcttcgtcgtcctgctcgaacaggggccggaagccgcccgtgaggccgcc
ctgcccgtcgccgagtag

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