Spirosoma linguale: Slin_6009
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Entry
Slin_6009 CDS
T01156
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sli
Spirosoma linguale
Pathway
sli01501
beta-Lactam resistance
sli01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Slin_6009
01503 Cationic antimicrobial peptide (CAMP) resistance
Slin_6009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sli03036
]
Slin_6009
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sli02000
]
Slin_6009
01504 Antimicrobial resistance genes [BR:
sli01504
]
Slin_6009
Chromosome and associated proteins [BR:
sli03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Slin_6009
Transporters [BR:
sli02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slin_6009
Antimicrobial resistance genes [BR:
sli01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Slin_6009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
Biotin_lipoyl
PTS_EIIA_1
Peptidase_M23
Motif
Other DBs
NCBI-GeneID:
8729790
NCBI-ProteinID:
ADB41971
UniProt:
D2QT39
LinkDB
All DBs
Position
complement(7289824..7290894)
Genome browser
AA seq
356 aa
AA seq
DB search
MKPIHILLSLSLAVATWACSSKADKAPANQATQSADDVVIPIKLTPVSSVVRAEPVIASG
LVSSAQEARLSFKIGGIIDRMFVEEGQSVRKGQLLATLDLTEINAQVSQAQLANEKAERD
LSRVKSLYADTAATLEQLQNATTGTSVAKQNLTIAQFNRNYAQIRSTVDGTVTRKVANAG
EFVAPGASIYLISSNRRSDWVVRVGVSDKDWARLRLGNRASISLDAYPGKTFNGTVTELA
QAADPVNKLYEVEVRIDPGTARFAPGLFAKVTLFPAQSGTYTVVPVEAIVEGNGKEGFVY
VLENVGAKPLHVRKQPIQIGYLDGDKVLVTNGLAGIKDVVTAGSAFLTEESTVIVK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaatacatattcttctttcgctgtcactagctgtcgctacctgggcgtgcagc
agcaaagccgacaaggcccccgccaatcaggcaacccagtccgccgacgatgtcgttatt
cccattaaactaacccccgtgagtagtgtggtgcgggccgaaccggtgatcgcatcgggt
ttggtttcgtcggctcaggaagcccggctgtcgttcaaaattggcggtatcatcgaccgg
atgtttgtggaggaaggccagtccgtccgcaaagggcaactgctcgctaccctcgacctc
accgaaattaacgcccaggttagtcaggcgcagctagccaatgaaaaagccgaacgtgac
ctgagtcgcgtgaaaagcctctatgccgacacggcagctaccctcgaacaactccagaac
gccaccaccggcaccagcgtcgcgaaacagaacctaaccatcgcccagtttaaccggaat
tacgcgcaaatccgctcgacggtagatggaaccgtaacccgaaaggtggccaacgctggc
gagtttgtagccccgggggcatccatctacctgatctcttcgaaccggcggagcgactgg
gtcgtgcgcgtaggggtatccgacaaggactgggcgcggctccgtctgggaaaccgggcc
agcattagcctcgacgcctaccccggcaaaacgtttaacggtaccgttacggagctagcc
caggccgccgatccggtgaacaagctctacgaagtggaagtacgcatcgaccccggcacg
gcccgattcgcgcccggcctgttcgccaaagtaacgctgtttccagctcaaagcggcacg
tataccgttgtacccgtcgaagctatcgtagaaggcaacggcaaagagggctttgtatat
gtactggaaaatgtcggcgccaaaccgctgcatgtgcgcaagcaacccatacaaatcggc
tatctggacggcgacaaggtactggtgacgaatggactggccggtatcaaagatgtcgtt
acggcaggatcggcatttttaaccgaagaatcgactgttattgtcaaataa
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