Sodalis ligni: GTU79_11690
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Entry
GTU79_11690 CDS
T08321
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slig
Sodalis ligni
Pathway
slig01501
beta-Lactam resistance
slig01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GTU79_11690
01503 Cationic antimicrobial peptide (CAMP) resistance
GTU79_11690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slig03036
]
GTU79_11690
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slig02000
]
GTU79_11690
01504 Antimicrobial resistance genes [BR:
slig01504
]
GTU79_11690
Chromosome and associated proteins [BR:
slig03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GTU79_11690
Transporters [BR:
slig02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GTU79_11690
Antimicrobial resistance genes [BR:
slig01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GTU79_11690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
RND-MFP_C
YknX_C
HH_MFP_RND
CzcB_C
HH_EMRA
Beta-barrel_RND_2
BSH_CzcB
HH_CzcB
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QWA13900
LinkDB
All DBs
Position
complement(2511030..2512163)
Genome browser
AA seq
377 aa
AA seq
DB search
MRHKLLIISLFLVTACDGSSSHTTQMASIPQVSIVTLHTQPVTLTTSLPGRTTAVRGAEG
RPQVDGIILKRLFTEGSEVTAGQPLYQIDPATYQAAYDKAQATLTNANALVKRYKPLSEA
HAVSGQVYDDAVASAKEAAADLETARVNLNYTQVRAPISGHIGRSIYTEGALVTSGQSNY
LTTIQQLNPMYVDVSESSQDLLRLRRALAQGHLKAAGDNSAAVLLTLEDGSPYGQEGKLE
FSEVTVDEGTGSVTMRASFPNPHNELLPGMFVHAILQQGVQEQGILIPQEAVSHDVKGKP
YVYTVKTDNTVEQRPITTGEMTNSLWQVTSGLQAGEKVITDGLQSVRVGIKVSANEHQTA
AASANDTSSSMNDPSAQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcgccataaattactgattataagcttgtttttggttactgcttgtgatgggtcttct
tcccataccacacaaatggcttcgataccgcaagtcagcattgtcacattgcatacccag
ccggtaacgttgaccaccagcctgccgggcaggaccactgcggtacgaggagcggagggt
cgaccacaagtggatggaattattctgaagcggctttttaccgaaggttccgaagtgacg
gcaggccagccgctgtatcaaatcgacccggccacttatcaggccgcttacgataaggcg
caggcgacgttaacaaacgccaatgctttggttaagcgttataaaccgctgtcggaagcc
cacgccgtcagcggccaggtctatgatgatgctgtcgcttccgccaaagaggccgcggct
gatttggaaaccgcaagggttaatctcaattatacccaggtcagagcgccgatttccggt
catatcggccggtcgatatacacggaaggcgcgttggtgaccagcgggcaaagcaattac
ctgacgactattcaacaattgaacccgatgtatgtagatgtcagtgaatcctcgcaggat
ttattgcgcctgcgccgtgcgctggcgcaagggcatttgaaagcggcaggggataattcc
gcggcggtgctactgacgcttgaagacggcagcccttatggtcaagagggtaaattggag
ttttctgaagtgacagttgacgaaggcaccggttcggtgacgatgcgggcctcttttcct
aatccacacaatgaattactgccgggcatgtttgttcacgccatcctgcaacagggcgtt
caggaacagggcatattgatcccgcaggaagcggtcagccatgatgtcaaaggcaaaccg
tatgtctataccgtgaaaacggataacactgttgaacaacgccccattaccaccggtgaa
atgaccaacagtctgtggcaagtcaccagcggattacaggctggcgaaaaggtgattacc
gacgggctgcaaagcgtgagggtcggtataaaagtcagtgccaacgagcatcagaccgcc
gctgcttctgccaacgacaccagttcttcgatgaacgatccgtcggcgcaatag
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