Sodalis ligni: GTU79_23140
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Entry
GTU79_23140 CDS
T08321
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
slig
Sodalis ligni
Pathway
slig00540
Lipopolysaccharide biosynthesis
slig01100
Metabolic pathways
Module
slig_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
GTU79_23140 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
slig01005
]
GTU79_23140 (lpxC)
Enzymes [BR:
slig01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
GTU79_23140 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
slig01005
]
Lipid A
GTU79_23140 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QWA10122
LinkDB
All DBs
Position
complement(4949908..4950825)
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AA seq
305 aa
AA seq
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MIKQRTLKRIVQATGVGLHTGKKVTLTLRPASANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIPIMDGSASPFVYLLLDAGI
EELNCAKKFLRVKQSVRVEDGDKWAELTPFNGFKLDFTIDFNHPAIDASSQRYRLDFSAE
SFVRQISRARTFGFMRDIEYLQSRGLCLGGSFDNAIVVDDYKVLNEDGLRFEDEFVRHKM
LDGIGDLYMCGHNIIGAFTTYKPGHALNNKLLQAVLARQEAWELVTFEDEAEMPLTFTAP
SFVMA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacagcggacacttaaacgtattgtgcaggccacgggtgtgggtctacatacc
ggtaaaaaggtcacactgactttgcgccctgcatcggctaataccggggtcatctatcgc
cgtacggatctcaatcctccggtggatttcccggcggatgcgaaatcggtgcgtgatacc
atgctttgtacgtgtctggtcaatgagcatgatgttcgtatatccaccgtcgaacatctc
aatgccgcattggcgggtttgggcatcgataacatcgtcattgaagtcaatgcgcctgaa
attcctattatggacggcagcgcgagcccctttgtctatctgctgctggatgccggaatc
gaagagctgaattgtgctaagaaattcctgcgcgtcaagcagtcggttcgcgtggaggat
ggcgataaatgggctgaattgacgccgtttaacggcttcaagctcgattttaccattgat
ttcaatcatcctgcgattgatgctagctcgcaacgttatcgcctggatttttccgccgag
tccttcgtccggcaaatcagtcgtgcacgcaccttcgggttcatgcgcgatatcgaatat
ctgcagtccaggggcctgtgcctgggcggcagcttcgataacgccattgtggtggacgac
tacaaagtgctgaacgaagacggtttacgtttcgaagatgagttcgtccgccataaaatg
ctggacggtattggcgacctgtacatgtgcggtcacaacatcatcggcgcgtttaccacc
tataaacccggccatgccctgaacaacaagctgttgcaggcggtactggcgcgtcaggaa
gcctgggaactggtgacctttgaagacgaagccgaaatgccgctgacctttaccgccccc
tcttttgttatggcataa
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