Sodalis ligni: GTU79_23850
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Entry
GTU79_23850 CDS
T08321
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
slig
Sodalis ligni
Pathway
slig00020
Citrate cycle (TCA cycle)
slig00270
Cysteine and methionine metabolism
slig00620
Pyruvate metabolism
slig00630
Glyoxylate and dicarboxylate metabolism
slig00680
Methane metabolism
slig00710
Carbon fixation by Calvin cycle
slig00720
Other carbon fixation pathways
slig01100
Metabolic pathways
slig01110
Biosynthesis of secondary metabolites
slig01120
Microbial metabolism in diverse environments
slig01200
Carbon metabolism
Module
slig_M00009
Citrate cycle (TCA cycle, Krebs cycle)
slig_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
slig_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
slig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GTU79_23850 (mdh)
00620 Pyruvate metabolism
GTU79_23850 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
GTU79_23850 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
GTU79_23850 (mdh)
00720 Other carbon fixation pathways
GTU79_23850 (mdh)
00680 Methane metabolism
GTU79_23850 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GTU79_23850 (mdh)
Enzymes [BR:
slig01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
GTU79_23850 (mdh)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
Motif
Other DBs
NCBI-ProteinID:
QWA10243
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All DBs
Position
complement(5109648..5110586)
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AA seq
312 aa
AA seq
DB search
MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTPVKIKGFSG
EDATPALEGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLISQVAKACPAALIGIITNP
VNTTVPIAAETLKKAGVYDKRKLFGISTLDIIRSNTFVAELKGLSPKDVEVRVIGGHSGV
TILPLLSQLEGISFSDQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGEKDVVECAYVEGDGEHTRFFAQPLLLGKQGLSEILPIGPLSAFEQQVLENMQDVLK
KDIELGVKFVNQ
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgcagttctcggtgcagcgggcggcataggccaagcgctagccctgttgctt
aaaactcagcttccctcaggttccgaactctctctgtatgatattgccccggtgactccc
ggtgtggcggttgatctcagccatatcccgaccccggtgaaaatcaaggggttcagcggc
gaagatgcgacgccggcgctggaaggcgccgatatcgtattgatctccgcgggggttgcc
cgtaagcccggtatggatcgttcggatctttttaacgtcaacgccggtatcgtacgcaat
cttatcagccaggtggcaaaggcctgtccggctgccctgataggcattatcaccaatccg
gtcaataccacggtgcccattgccgcagagacgctgaaaaaagccggcgtctatgataaa
cgcaagttattcggcatctccaccctcgatattatccgttccaatacttttgtcgccgag
ctcaaaggattgtcgccgaaagatgttgaagtgcgtgttatcggcggccattccggtgtg
accattctgcctttgctttcccagctagaaggaatctcatttagcgatcaggaagttgcc
gatttaaccaagcgtatccagaatgccggtaccgaagtggtagaggccaaagccggcggc
ggatcggccacgctctccatgggacaggccgcggctcgcttcggcttatctctggtacgg
gcgctgcagggtgaaaaggatgtggtggaatgcgcttatgtcgagggcgatggcgagcat
acgcgtttctttgcccagccgctgctgttgggcaaacagggtttgtcggaaatactgccc
attggccccctgagcgctttcgaacagcaggtcctggaaaacatgcaggatgtcctgaaa
aaagatattgaattaggcgtgaaattcgtcaatcaataa
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