Streptococcus lingualis: SM123_05020
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Entry
SM123_05020 CDS
T10630
Symbol
ldcB
Name
(GenBank) LD-carboxypeptidase LdcB/DacB
KO
K07260
zinc D-Ala-D-Ala carboxypeptidase [EC:
3.4.17.14
]
Organism
slin Streptococcus lingualis
Pathway
slin00550
Peptidoglycan biosynthesis
slin01100
Metabolic pathways
slin01502
Vancomycin resistance
slin02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
slin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SM123_05020 (ldcB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SM123_05020 (ldcB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SM123_05020 (ldcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slin01002
]
SM123_05020 (ldcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slin01011
]
SM123_05020 (ldcB)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
slin01504
]
SM123_05020 (ldcB)
Enzymes [BR:
slin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.14 zinc D-Ala-D-Ala carboxypeptidase
SM123_05020 (ldcB)
Peptidases and inhibitors [BR:
slin01002
]
Metallo peptidases
Family M15: zinc D-Ala-D-Ala carboxypeptidase family
SM123_05020 (ldcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
slin01011
]
Peptidoglycan biosynthesis and degradation
Carboxypeptidase
SM123_05020 (ldcB)
Antimicrobial resistance genes [BR:
slin01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
SM123_05020 (ldcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VanY
Macoilin
Conotoxin
DUF1244
New_glue
Apis_Csd
Serinc
LPAM_1
Nab6_mRNP_bdg
Piezo_TM1-24
SSP160
Motif
Other DBs
NCBI-ProteinID:
WPS45952
UniProt:
A0ABZ0STE4
LinkDB
All DBs
Position
1069247..1070026
Genome browser
AA seq
259 aa
AA seq
DB search
MKARFSKLTLVTVALLTLTACSQSQSTSSKSSAREETKQTQTKSSKGTSSAKDTSKETGK
EESSKAGKSDVKVDSGVSYNGSYYSVKGKYGEVMIANKHYPLSPDFNPGEDPEAVSALHE
LIAAMQAEGYPISDQYSGFRSYDTQVGLYQNYVNQDGQEAADRYSARPGYSEHQTGLTFD
LIDTSGNLVTEPGPSKWLLKNAAKYGFVVRYQEGKEKVTGYMPESWHLRYIGKEAQDIAD
SGLSLEEYYGFTGGDYVDK
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaagattttccaaattaactttggtgacagttgccttgttaaccttgacagct
tgctcccaatctcaatccactagttctaaatcttctgcaagagaagaaactaaacaaacg
cagactaagtcttccaaaggaacgtcttctgcaaaggatacgtcaaaagaaactggcaaa
gaagagtcgtcaaaagctggtaagtcagatgtgaaagtggattctggtgtcagctataat
ggttcctactatagtgtcaaagggaaatatggtgaggtcatgatcgccaacaaacattat
cccttgtcgcctgactttaacccaggtgaagatcctgaagctgtttcagcccttcatgaa
ttgatcgcagccatgcaggcagaaggttatccgatcagtgaccaatatagtggttttcgt
agctacgatacccaagttggcctctatcaaaactatgtcaatcaagatggtcaggaggca
gcagatcgttattccgcaagaccgggttatagtgaacaccaaactggtttgacctttgat
ttgatcgataccagtggtaatttggtaactgaacctggaccaagtaagtggttgctcaag
aacgccgctaaatatggctttgtggttcgctaccaagaaggaaaagaaaaagtgacaggc
tacatgccagagagctggcatctccgctatatcggaaaagaagcacaagatatcgctgac
tcaggtttgagtctggaagaatactatggcttcaccggtggcgattacgttgataaataa
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