Streptococcus lingualis: SM123_07460
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Entry
SM123_07460 CDS
T10630
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
slin Streptococcus lingualis
Pathway
slin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SM123_07460 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slin03400
]
SM123_07460 (nth)
Enzymes [BR:
slin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SM123_07460 (nth)
DNA repair and recombination proteins [BR:
slin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SM123_07460 (nth)
Prokaryotic type
SM123_07460 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WPS46421
LinkDB
All DBs
Position
complement(1560293..1560916)
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AA seq
207 aa
AA seq
DB search
MVLSKKRARHVIEEIIALFPDAKPSLDFRNHFELLVAVMLSAQTTDAAVNKATPGLFAAF
PTPQAMAAASEADIAKHISKLGLYRNKAKFLKKCAQQLLDNFDGQVPQTREELESLAGVG
RKTANVVMSVGFGIPAFAVDTHVERICKHHDIVKKSATPLEVEKRVMDVLPKSEWLAAHQ
AMIYFGRAICHPKNPECDQYPQLYHFD
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggttttatcaaagaaacgggcacgtcatgtgattgaagaaattatcgccctctttcca
gatgctaagccaagtctggattttcgtaatcattttgaattgttagtagcggttatgctc
tcggctcagacgactgatgcggctgttaacaaagcgacaccaggtttgtttgcggctttt
ccaaccccgcaagccatggcagcagccagtgaagctgatatcgccaagcatatttctaaa
ttaggcctctatcgaaataaggccaaatttctcaaaaaatgtgcccagcaattgctagat
aactttgatggtcaagtgcctcagactcgtgaagagttagaaagtctagcaggagtagga
cgcaagacagctaatgtggttatgagtgtaggatttgggattccagcttttgctgtcgat
acccatgtggagcggatctgcaagcaccatgatatcgtcaagaaatcagcgacgccattg
gaagttgaaaagcgggtcatggatgttctgccaaagagcgaatggctagcggcccatcaa
gccatgatttattttggacgggccatctgccatcctaaaaatcctgaatgtgaccagtat
ccacaactctatcattttgattag
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