Simiduia litorea: R50072_06680
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Entry
R50072_06680 CDS
T10759
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slio Simiduia litorea
Pathway
slio01501
beta-Lactam resistance
slio01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R50072_06680
01503 Cationic antimicrobial peptide (CAMP) resistance
R50072_06680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slio03036
]
R50072_06680
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slio02000
]
R50072_06680
01504 Antimicrobial resistance genes [BR:
slio01504
]
R50072_06680
Chromosome and associated proteins [BR:
slio03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
R50072_06680
Transporters [BR:
slio02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
R50072_06680
Antimicrobial resistance genes [BR:
slio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R50072_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
YqfD
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
BFM10515
LinkDB
All DBs
Position
complement(759744..760823)
Genome browser
AA seq
359 aa
AA seq
DB search
MNNLIKRWGLPTLAVIVLLLMVAWMAGFFSNKLAPGAVQNTPINGAQALGVNSASYAIYE
AVPASVEAKQATVISARIMARITSIKVRSGDDVTQGQLLLTLEKTDLTSKVKQAGEQIRA
ITARLTEAQQNLERATKLQKQGLLAAADLDKARANHDALKADLAAAQQAQQETNIAVSYS
EIRAPIDGRVVDRFAEPGDTAAPGNKLLTLYNPLTLRVEAQVREQLALTLQENQRLRVEI
PALNLKLDAELEERVPAADPGSRSFLIKVRMPFNAQLQPGMYARLLVPAGEREQIRIPAD
RIVTVGQLDLVWVLQDGQAYRRFVKLGNTYGDQIEVLSGLSDGDKILPIPDRATSAKDF
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctgattaaacgctggggcctgccaacactcgccgtcatcgttttattgtta
atggtcgcgtggatggctggcttttttagcaataaattagcacccggtgccgtgcaaaac
acccctatcaacggcgctcaagcactgggcgtaaactccgccagttacgccatttacgaa
gcggtaccagcctcggtggaagcgaagcaggcaacggttatttccgcacgtattatggcg
cgcattaccagcatcaaggtgcgctcgggcgatgacgtgacacaagggcaattgctgtta
accctggaaaagaccgacttaacatcaaaagttaaacaggcaggtgaacaaattcgcgcc
ataaccgcgcgcctaaccgaagcacaacagaatttggagcgcgcgacaaagctacaaaag
caaggcctgctggcggccgctgatttagacaaagcacgtgccaaccacgatgcgctaaag
gctgatctcgccgccgcacaacaggcgcagcaagagaccaatatcgcggtgagctattct
gaaatcagagcgcccatcgacggtcgcgtggtggatcgatttgccgaacctggcgatacc
gcagcaccgggcaacaaattgttaaccctatacaatccacttacgctgcgggtagaagcg
caagtgcgggaacaattagcgctaacgctgcaagaaaatcaacgcctacgggtagaaatt
ccagccctgaatttaaaactcgacgccgaactcgaagagcgagtaccggctgccgacccc
ggctcacgtagttttttgatcaaagttcgcatgccgtttaatgcgcaattacaaccgggc
atgtacgcgcgcttattagtgccagcgggcgagcgcgaacaaattcgcatccccgcagac
cgaatcgtaacagtgggacaactggatttggtgtgggtgctgcaagatggtcaggcctat
cgccgctttgtcaaactcggcaatacctatggcgaccagatagaagtgctctccggttta
agcgatggcgataaaattctccccatccccgatcgggcgacgagcgctaaagacttttaa
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