Simiduia litorea: R50072_25950
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Entry
R50072_25950 CDS
T10759
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
slio Simiduia litorea
Pathway
slio01501
beta-Lactam resistance
slio01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R50072_25950
01503 Cationic antimicrobial peptide (CAMP) resistance
R50072_25950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slio02000
]
R50072_25950
01504 Antimicrobial resistance genes [BR:
slio01504
]
R50072_25950
Transporters [BR:
slio02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
R50072_25950
Antimicrobial resistance genes [BR:
slio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R50072_25950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BFM12442
LinkDB
All DBs
Position
2958014..2961136
Genome browser
AA seq
1040 aa
AA seq
DB search
MVLSDLSIRRPVLATVFSLLLVAFGLVAFDRLPLREYPDIDPPVVSIETRYAGASASVVE
TRITKVIEDRISGVEGIKYIQSSSEDGRSNVTVEFDVSRDIDAAANDIRDRVSRVRDSLP
READAPDIQKVDADDQAIVWLNLVSTNLTLPELTDYAERYLVDRFSVLPGVARVRVGGAQ
SFAMRVWINRQALAAQGLTVSDVENALRSENVELPAGSIESIERQFTVRVERTFRTEDDF
KNLVLRQGKDGYLVRLADVARVERGTVENRTLFRGNGQPMVGLGISKQSTANTIDVARNA
QREMERLNPTLPKGMEIKPSYDSSVFIEASINEVYKTLAIAIALVVLVIYLFLGSVRAML
IPAVTVPVSLIATSIILFALGFTINLLTLLAFVLAIGLVVDDSIVVLENIHRRIEEKHET
PLVAAFKGTRQVGFAVVATTLLLVSVFVPITFLEGDIGQLFTEFALTLSAAVIFSSFVAL
TLSPVMATKLLKKNTKPTVLVRFMDDLFARIKANYSTLLQKLLPRTGIAAALILFMFGAG
AWMLNSIPSEYVPKEDRGSFFIMVNGPEGASYKYSVDYMNEIEARLQHFIENGEALRVLI
RAPRSFGNATDFSGGFVIVTLNDWSDRRSAWEIMDDMRQRMSDLPGVRAFPVMRQGIRGG
NNKPVQFVLGGSTYEELAGWRDQIMALINENNPGFTDIDWDYKETKPQFKVIIDYNRAAE
LGVTVNAIGTSLESLLGSRRVTTYLDNGEEYDVIIEGERDDKRSITDTQNIYVRSARSGE
LIPLSNLVTLEAFADSGTLNRYNRIRAITMEANLNGLALGEGLDFLDKLVAENLPEYAQI
DYKGDSLDYKFAGQSIIFVFVLGLVVVFLVLAAQFESFIHPMIIMLTVPLAIAGGLFGLW
TTGNSLNIYSQIALLMLIGLAAKNGILIVEFANQLRETGKDIQVAIMEASAVRLRPIVMT
SITTMAGALPLIFSFGAGAETRIMIGVTLFYGVLAATVFTLFIIPVAYSVFAKFAGTPGY
VAKQLDSELDQNVKDKTLGH
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggtactgtcagacctctccattcgccgccccgtattagccaccgtattctctttgctg
ttagtggccttcgggctggtcgccttcgaccgtttacccctgcgcgaataccctgatatc
gatccaccggttgtctccatcgaaacacgctacgctggcgctagcgccagcgtggttgaa
acccgcattaccaaagtcattgaagaccgcatatctggcgttgaaggcattaaatatatt
caatcttcgagcgaagacgggcgctccaatgtcacggttgaattcgatgtatcgcgcgat
attgacgccgccgccaacgatattcgcgatcgtgtatctcgcgttagagactcactaccg
cgcgaagctgacgctcccgacatccaaaaagtcgacgccgatgaccaagccatcgtctgg
ctcaacttagtcagcactaacttaacgctacccgaactgaccgattacgcagagcgctac
ctggtcgaccgcttcagtgtattacccggcgttgcccgggtgcgggtgggcggcgcgcaa
agctttgcaatgcgcgtctggattaaccgccaggcgctagccgcccaaggtttaaccgtt
agcgacgtcgagaatgcactacgctccgaaaacgtcgagctacccgcaggctccattgaa
tccatcgagcgtcaatttaccgtgcgggtcgagcgcacctttcgcaccgaagacgatttt
aaaaatctggtattacgtcaaggtaaagatggctacctcgtgcgcctagcagacgtcgct
cgggtcgagcgtggcactgtagagaatcgaaccctatttcgcggtaacggccaacccatg
gttgggctcggcatatcgaagcaaagcaccgccaataccatcgacgttgcgcgcaatgcg
cagcgagaaatggagcgcctaaacccaaccctacccaagggcatggaaatcaaacccagc
tatgactcctctgtatttattgaggcatcgatcaacgaagtgtacaaaaccttagcgatt
gccatcgctctggtggtgctcgttatctatttatttttgggtagcgtgcgcgctatgttg
attcccgcggtcaccgttccggtgtcactcatcgccacctccatcattctctttgcactg
ggctttaccattaacctgctcaccctgctggcatttgtattggcgatcggactagtggtg
gatgactccattgtggtgctcgaaaacatccaccgtcgcattgaagaaaaacatgaaacg
cctttagtcgctgctttcaaaggcacccgacaggtcggtttcgccgtagtggcaacgacg
ctgttgttggtatcagtgttcgtgcctatcaccttcctcgagggtgacataggtcaatta
tttaccgaattcgctctcacgctatccgccgctgttattttttcaagctttgttgcctta
acactttcaccggtcatggcaacaaaattattgaaaaaaaatactaagccaaccgtgctg
gttcgcttcatggatgacctgtttgccagaataaaagccaattattcaaccctactgcag
aaattactccctcgaacaggtattgccgcagcgctgattctatttatgtttggcgccggc
gcctggatgctaaatagcataccgagcgaatatgtaccgaaagaagatcgcggttcattt
ttcatcatggtcaacgggcccgagggtgcgagctacaaatatagcgtcgactatatgaac
gagattgaagcgcgactgcagcattttattgaaaacggcgaagcactgcgggtactcatt
cgggcaccaagaagcttcggcaacgccaccgatttctcgggtggctttgtgattgtcacc
ttaaacgattggagcgaccgccgctcggcgtgggaaatcatggacgatatgcggcaacgc
atgagtgacttgcccggtgttcgcgctttcccggtgatgcgccaaggcatcagaggcggt
aataacaaacctgtacaattcgtcttgggcggttctacctatgaagagttggccggttgg
cgcgatcaaatcatggctctcattaatgaaaacaaccccggcttcaccgatattgattgg
gattacaaggagactaaaccgcagtttaaagtaatcatcgactacaatcgcgccgccgaa
ttaggcgtcaccgttaacgcgattggcacgagcttagaaagcttactgggctcgcgccgt
gtgacaacttacctcgataacggcgaagagtacgacgtcatcatagaaggtgaacgcgat
gacaagcgatcgataaccgatacgcaaaacatctacgttcgctcggcccgcagcggcgag
cttattccgttgtcaaacttggtaacgctagaagcctttgccgattctggcacactaaat
cgctacaacagaatccgcgctattaccatggaagccaacttaaatggtctggccttggga
gaaggcttagactttctggacaagctagtggctgagaatctccccgagtatgcacaaatc
gattacaaaggtgactcgctcgattataagtttgccggacaatccatcatcttcgtattt
gtgctcggtttagtcgtcgtgtttttggtcttggcagcgcaatttgaaagttttattcac
cccatgatcatcatgctaacagtgcccttggcgattgccggcggtctctttggcctttgg
acaacgggtaactcgctcaacatttacagtcaaattgctctgcttatgttgattggtttg
gcggcgaagaatggcatcttgatcgtggagtttgccaatcagttacgcgaaaccggaaaa
gatattcaagtcgccatcatggaagcgtctgccgtgcgtttaaggcccatcgtgatgaca
agtatcaccaccatggctggcgccctgccgctaatattttcttttggcgccggcgcggaa
acgcgcatcatgatcggcgtcacgttgttttatggcgtcttagccgccaccgtattcacg
ctgtttatcattcctgtggcctattctgtgtttgccaaattcgccggtacacccggctat
gtagccaagcaactcgatagcgaactcgatcagaacgtaaaggataaaacccttggtcat
tga
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