Simiduia litorea: R50072_31910
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Entry
R50072_31910 CDS
T10759
Symbol
vmeQ
Name
(GenBank) efflux RND transporter permease subunit VmeQ
KO
K18138
multidrug efflux pump
Organism
slio Simiduia litorea
Pathway
slio01501
beta-Lactam resistance
slio01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slio00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R50072_31910 (vmeQ)
01503 Cationic antimicrobial peptide (CAMP) resistance
R50072_31910 (vmeQ)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slio02000
]
R50072_31910 (vmeQ)
01504 Antimicrobial resistance genes [BR:
slio01504
]
R50072_31910 (vmeQ)
Transporters [BR:
slio02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
R50072_31910 (vmeQ)
Antimicrobial resistance genes [BR:
slio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R50072_31910 (vmeQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BFM13038
LinkDB
All DBs
Position
3609798..3612905
Genome browser
AA seq
1035 aa
AA seq
DB search
MISKFFIHRPKFAFVISIVITLAGSLSLMTLPVNLYPEIAPTQIQVTATYPGASADVVEE
TVLRPLEEQINGVEGMEFMESTASNSGLATITVTFKTGVDGDMAQVNVKNRASLAESSLP
PEVMRDGVQTLKQSTSMLLGINLIGESEQFDTTFLSNYAISNLQEPLARIAGVAKAEVMG
DFQYAMRIWLDPTKMNALDVTVTDIQAAITEQNTVVAAGKLGAGPVIPGQQFEYTIQTQG
RLQDASQFADTIIRANPDGRFLRLKDVARVEMGSRSYSNAVKLDGQDTAFLVIYQLSDAN
ATLVAEAIHAEMARLAPMLPDGMRYEILYDTTDFINESIAEVYSTLFVAVALVILVVFLF
LQNWRATLIPAIAIPVSLIGTFALMNALGYSVNTITLFGLVLAIGVVVDDAIVVIENVER
IMKEEGLGGVDATLKAMEQVTGPIIATTLVLMAVFVPVGFMPGITGEIYKQFSVTISSAV
FISSINALTLSPALCAVLLKPEHMTPIKWLAPVEKLIHRSTAGYTGIVGWLLKRGGRVAV
FTLLLLGGTYWLIASTPTGFVPNEDQGFLFVDVQLPDAASANRTEEVMQKITGWVGNEPG
VRNFITVSGFSILSGGATNGGLGIVILDHWSKRKDPALFADTLQKKLQGKLWALPDAQVM
VINPPPVPGLGSASGFDFRLQDTQGRDSKELAAVMGGLIYSANQREDLAYAFSTFRANVP
QYFLDVDRNKAKAMGIQLSDIFMTLQAQLGSLYINDFSKFGRNYRVMIQAESQFRQEPSD
LLHFYVRNRDGQMVPLSTLATLSPAQGPTSISRFNMFRSATINGEAAPGFSSGDALQAMQ
LLADQLPDGYAFEWAGQSRQEVEAGNLAPILFGLAILFVYLFLVAQYESWNIPFAVLGAV
PIAIFGALAGLSLAGMVNDVYAQVGMVLLIGLAAKTAILIVEFAVEQRAAGDSVIEAAAN
AARLRFRAVLMTALSFVLGVIPLVTATGAGAASRVSLGVTVLCGMLAATLIGTVLLPSFY
QGIQNLREKFKAQQD
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtaaattctttatccatcggcctaaattcgcctttgttatctccattgtcatc
acgctagcgggttcgctatcgctcatgaccctgcccgttaacctctacccagaaattgca
ccgacgcaaatacaggtgactgctacctatcccggcgcctcggccgatgtcgttgaagaa
accgtactgcggccgctcgaagagcaaattaacggcgttgaaggcatggagttcatggag
tctacggcttctaactcaggcctcgccaccatcaccgtgacctttaaaaccggtgtcgac
ggcgacatggcgcaagtgaatgtaaaaaaccgcgcatcgctggcagaaagttcattacca
cctgaagttatgcgcgatggcgtgcaaacgctgaagcaatccaccagcatgttactgggc
attaatttaattggcgaaagcgaacagttcgacaccacgtttttatcaaattacgccatc
agtaacttgcaagaacctttggcacgtatcgccggtgtcgccaaggccgaagtgatgggt
gacttccaatacgccatgcggatttggttagacccgacaaaaatgaacgcgctagacgtt
acggttaccgatatccaagcggcaatcactgagcaaaatacggtcgttgctgccggtaaa
ttaggtgctggccccgtcattcctggtcaacaatttgaatacaccattcaaactcagggt
cgcttgcaagacgcctcacaatttgccgacacaatcattcgcgccaaccccgatggccgc
ttcctacgtcttaaagatgtggctcgcgtagagatgggttcgcgcagttatagcaacgcc
gtaaagctcgatggtcaagacaccgcctttctggtcatttatcaattatctgacgccaac
gccaccttagtggccgaagcaattcatgccgaaatggcgcgtttagcaccgatgttgccc
gacgggatgcgctatgaaattctgtacgacacgaccgattttattaacgaatctatagcc
gaagtttactccacactgtttgttgctgtggccttggtgatcttggttgtatttttattt
ttacaaaattggcgtgcgacgctaattcccgccattgccataccggtatcccttatcggt
accttcgcgttgatgaatgcactcggctattcagtcaataccatcaccttatttggctta
gtcctcgccattggagtggtggtagatgatgccattgtggtcattgaaaacgtcgagcgc
atcatgaaagaggaaggcttaggtggcgtggacgccacactaaaagccatggagcaagtc
actggcccgatcatcgccaccaccttagtgctgatggctgtgttcgtgccagtgggcttc
atgcctggcatcaccggtgaaatttacaaacaattctccgtaaccatttcctcagcggta
tttatctcctccatcaatgcactcaccttaagcccagcgctctgcgcggtgttgctaaaa
cccgagcacatgacaccgattaaatggttggcgcccgtggaaaagttaatccaccgctca
accgccggttacactggcatcgtcggctggctattaaagcgcggtgggcgggtagccgta
tttacactgctattgctcggtggcacttactggttaattgctagcacgcccacaggcttc
gtgcccaatgaagaccaaggcttcttgttcgtggatgtgcaattacccgacgctgcatca
gccaatcgcaccgaagaggtgatgcagaaaatcaccggctgggtgggtaacgagccaggc
gtacgcaactttattactgtgtcgggtttcagtattctcagcggcggcgccaccaatggc
ggcctcggtattgtcattttagatcactggtcaaagcgcaaagaccccgcactgttcgcc
gacacactacagaaaaaattacagggtaagttatgggcgctacccgacgcgcaagttatg
gtgatcaacccaccgccagtgcccggtttgggcagtgcctcgggttttgactttaggtta
caagacacgcaagggcgggactcgaaagagctggctgcggtaatgggcgggttaatctat
tccgccaaccagcgcgaggatttggcctacgcttttagcaccttccgcgccaatgtgccg
caatacttcttggacgtcgaccgcaataaagccaaggctatgggtatccaattgtcggat
attttcatgaccctgcaggcgcaactcggctcgctctacatcaatgacttctccaagttt
ggccgcaattatcgggtcatgattcaagcggaaagccagttccgccaagagccgtcggat
ttactgcacttctacgtgcgcaatagagacgggcaaatggtgccgctctcgacgctcgcg
accctctcgccagcacaggggccaacgtctatctcccgcttcaacatgttccgctcggcc
accatcaatggcgaagcggccccaggcttcagctccggcgacgcactgcaagccatgcaa
ctgctggccgatcaactgcccgatggttacgctttcgagtgggccggacaatctcggcaa
gaagtggaggccggtaatctagcccccattttatttggcctagcgattctgttcgtctac
ctcttcttagtggcgcagtacgaaagctggaatatccctttcgccgtactcggggcagta
cctatcgctatttttggtgccttggcgggattatccctggccggtatggttaacgatgtt
tacgcccaagtgggtatggtgctactcattggcttggcggcaaaaaccgccattctcatc
gtcgagttcgcggtggagcagcgcgctgctggggattcggttatcgaggccgccgccaac
gccgcgcgcctgcgcttccgcgccgtactgatgaccgcgctgtctttcgtattgggcgtg
attcccttggtaacagccacgggcgctggcgccgcgtcgcgggtgtccttgggggtcacc
gtgttgtgcgggatgctcgccgcaaccttgataggcacggtacttttgccgtctttctac
caaggcatacaaaacctccgagagaagttcaaagcgcagcaggactag
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