Shewanella litorisediminis: JQC75_00630
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Entry
JQC75_00630 CDS
T07182
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slit
Shewanella litorisediminis
Pathway
slit01501
beta-Lactam resistance
slit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JQC75_00630
01503 Cationic antimicrobial peptide (CAMP) resistance
JQC75_00630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slit03036
]
JQC75_00630
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_00630
01504 Antimicrobial resistance genes [BR:
slit01504
]
JQC75_00630
Chromosome and associated proteins [BR:
slit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JQC75_00630
Transporters [BR:
slit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JQC75_00630
Antimicrobial resistance genes [BR:
slit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JQC75_00630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
RapA_C
Biotin_lipoyl_2
PUA_4
Motif
Other DBs
NCBI-ProteinID:
QRH01986
LinkDB
All DBs
Position
complement(139237..140307)
Genome browser
AA seq
356 aa
AA seq
DB search
MTYFKTALLAMALILCVPALAADERSVGVATVQQRPLSPKLMVVGTVHSRSLAQLTTGVA
GKLEWVQEAGTRVAVGEVVARLDATPLTLQLAEQQALVKREEIALARLERNLTRLERLAA
SQSISRTEIDDTRSERDLAKSSLELAKVRLDIIRDNLARTQLKAPFGGIVIARSHQAGED
VGPAEPVLTITDPDHLEIRLHAPLKHSRRVNAGDELKVYHSNGEFSARIRTLIPVSDVRS
QTFEARLDLPEAMAREINIGELVSMALPIAPATLTTLVPRDALVLRSSGASVFRVTAGQT
AERIPVTLGDGEGPWIAVRGELSAGDSVVIRGAETLTDGVKLTVQQAAAQATASAK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgacttattttaaaactgccctgctggctatggcgctgatcctctgtgttccagcgctg
gcggcagatgagcgttcggttggggtagcgactgtgcagcagcgccccctgtcacccaaa
ctcatggtggtaggcactgtgcacagtcgcagcctggcgcagctgaccacgggtgttgcc
ggaaagcttgaatgggtgcaggaagcaggcacccgggtggctgtcggcgaggtggtggcc
cgtctggatgccacgccgctgacgctgcaactggccgagcaacaggcactggtcaagcgg
gaagaaattgcactggcacgcctcgagagaaatctcacccgactggagcggcttgccgcc
agccaaagcatttcccgcaccgagatcgacgacacccgctccgagcgggacctggccaaa
agcagtctggagctggccaaagtcaggctggatatcatccgtgacaatctggcccgcacc
cagcttaaggcgcccttcggtggcattgttatcgcccgaagccatcaggccggcgaagat
gttggccctgctgagcctgtgctgaccatcacagacccggatcatctggaaatccgactc
catgcccccctgaagcacagccgcagggtgaatgccggggatgagctcaaggtgtaccac
agcaacggcgaattcagtgcccgcatccggaccctgatccccgtatcggatgtgcgaagc
caaacctttgaagcccgactcgacctgccagaggccatggcgcgtgaaatcaacattggt
gaactggtgtccatggccctgcccatagcaccggcgaccctgactaccctggttccccgg
gatgcactggtactgcgctccagcggcgccagtgtgtttcgtgtcaccgccgggcaaaca
gcggagcgtatccctgtgaccctgggagacggtgaaggcccctggatagcggttcggggc
gaactcagcgccggtgacagcgtggtcatccgcggcgccgagaccctgaccgacggcgtg
aaactcaccgtgcagcaggcggcagcccaggccacggccagcgccaaatag
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