Shewanella litorisediminis: JQC75_06975
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Entry
JQC75_06975 CDS
T07182
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slit
Shewanella litorisediminis
Pathway
slit01501
beta-Lactam resistance
slit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JQC75_06975
01503 Cationic antimicrobial peptide (CAMP) resistance
JQC75_06975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slit03036
]
JQC75_06975
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_06975
01504 Antimicrobial resistance genes [BR:
slit01504
]
JQC75_06975
Chromosome and associated proteins [BR:
slit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JQC75_06975
Transporters [BR:
slit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JQC75_06975
Antimicrobial resistance genes [BR:
slit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JQC75_06975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
BSH_CzcB
Beta-barrel_RND_2
CzcB_C
BSH_CusB
RND-MFP_C
Biotin_lipoyl
BSH_YknX
Beta-barrel_RND
HH_EMRA
BSH_YhbJ
BSH_LcnD
Peptidase_M23
PTS_EIIA_1
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
QRH03140
UniProt:
A0ABX7G7H9
LinkDB
All DBs
Position
complement(1601759..1602823)
Genome browser
AA seq
354 aa
AA seq
DB search
MEARKSFKLALPLLLVGVLAACGQEEAKKEEEKYAIPVETQLVVQGNVSSFYSTTATLEA
PVEAHVVTRIAGMIEALHVEEGDRVKQGQLLAVIDAKRQQYELDRSEAEVLIIEQELARV
KKMKSKDFVSADSIAKLEYNLQAAKARLDLAKLQVKESQIVSPVDGIIAKRHVKAGNMAK
EFEELFYVVNQDELHGIVHLPEQQLSSLRLGQHADIYASNNKQNAVGAEVLRISPVVDAQ
SGTFKVTLKVPNQQAILKAGMFTRVELKYDTHENVITVPYNAIINQDNKQTLYVIQDTTA
ERREVELGYREGNLVEVVSGIAPGEHLVIRGQQNLKDQSLVEIISPLDVASVKN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccgcaaatcattcaaactcgccctccccttactacttgttggcgtacttgcc
gcatgtggccaggaagaagctaaaaaggaagaagaaaaatacgccatacctgttgagacc
caattagtggttcagggcaatgtctcctcattctattccaccacagccaccctcgaagca
ccggtggaagcccatgtggtgacccgaatcgccggtatgattgaagccttgcacgtcgaa
gaaggcgacagggtgaagcagggtcaattgctggcggtaatcgacgccaagcgtcagcaa
tatgaactcgaccgctctgaggccgaagtgctcatcatcgagcaggaactggcccgggtg
aaaaagatgaagagcaaagactttgtcagcgccgactccatcgccaaactcgaatacaac
ctgcaggctgccaaggcccgtttggatttggccaagctgcaggttaaagagagtcaaatc
gtgtctcccgtggatggcatcatcgccaaacgccatgtcaaggccggcaacatggccaaa
gagttcgaagagctgttctatgtggtcaatcaggatgagctgcacgggatagtgcatctg
ccggagcagcagctttccagcctgcgtcttggacaacatgcagacatctacgccagcaac
aacaagcaaaatgccgtgggagccgaagtcctgcgcatcagtcctgtcgtcgatgcccaa
agcggtacctttaaggtcaccctcaaggtgcccaatcagcaagctatcctcaaggccggc
atgtttacccgggttgagctgaagtacgacacccatgaaaacgttatcaccgtgccttac
aacgccatcatcaaccaggacaacaagcagaccctgtatgtcattcaagacaccactgcc
gagcgccgcgaagtggaactgggatatcgcgaaggtaatctggtggaagtggtctcaggt
attgcacccggagagcatctggtgatccgtgggcaacaaaacctcaaagaccagtctctg
gtagaaatcatctccccactggatgtggcttcggttaaaaactaa
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