Shewanella litorisediminis: JQC75_08920
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Entry
JQC75_08920 CDS
T07182
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18299
multidrug efflux pump
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_08920
01504 Antimicrobial resistance genes [BR:
slit01504
]
JQC75_08920
Transporters [BR:
slit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JQC75_08920
Antimicrobial resistance genes [BR:
slit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
JQC75_08920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QRH03475
LinkDB
All DBs
Position
2051315..2054491
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AA seq
1058 aa
AA seq
DB search
MLSQFFIKRPIFAAVISLLFFITGAIAVWQLPVTEYPEVVPPTVVVTANYPGANPKVIAE
TVASPLEQEINGVENMLYMSSQATSDGRMTLTVTFAIGTDVNLAQTQVQSRVERAKPRLP
QEVQRLGVVTEKSSPDLTMVVHLTSPDERYDMLYLSNYAALNVKDELARIEGVGSVQLFG
AGDYSMRIWLDPNKVAALGLSPAQITAAIREQNQQAAAGSLGAQPSGAAEFQLLINVKGR
LAAVEEFENIIIKVGQNGEISRLKDVARLELGASTYALRSLLNNKEAVAIPIFQASGSNA
IQISDDVRAKMAELAKSFPDGLSYDIVYDPTVFVRGSIEAVVKTLLEAVLLVVLVVVLFL
QTWRASIIPLVAVPVSLVGTFAFMQLMGFSLNALSLFGLVLAIGIVVDDAIVVVENVERN
IRDGLSPVAATQKAMKEVTGPIVATTLVLAAVFIPTAFMSGLTGQFYKQFALTITISTFI
SAINSLTLSPALSALLLKGHGEKKDGLTRAMDKLLGGWLFGPFNRFFARLSAGYGYLVRK
VIRFGAIVGVLYIALVGLTGLQFATTPTGYVPGQDKQYLVAFAQLPDASSLERTDAVVKR
MSSIALDHLGVIDAIAFPGLNINGFTNSPNSAVIFVGLDSFEVRDSAELSANAIAGALNQ
KFAAIEDAFIAIFPPPPVAGLGTIGGFRLQIQDRANLGYEELYKVTMQVMMKAWQTPELA
GVFSSYQVNVPQLDLDIDRTKAKQQGVALDEVFQTLQAYMGSVYVNDFNQFGRTYQVNMQ
ADEQFRQTPEQIGQLKVRNNQGEMIPLASFIKVTNSAGPDRVMHYNGFTTAEINGGPAPG
ISSGEAQALMEKILAETLPNGMTYEWTELTYQQILAGNAGIFIYPLVILLVFMVLAAQYE
SLRLPLAIILIIPMTLLSALSGVLIYGGDNNIFTQIGLIVLVGLATKNAILIVEFAKELQ
DHGMSALEAILEAGRLRLRPILMTSIAFIMGVVPMVFSSGAGAEMRQAMGVAVFAGMIGV
TIFGLILTPLFYYLLAKRGETKVKQLANGNDVAEGAHA
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgcaattttttattaagcggccgatctttgccgctgtaatatctctgctgttt
tttattaccggcgccatcgctgtgtggcagctgccggttactgaatatccggaagtggta
ccacccacagtggtggttaccgccaattacccgggtgccaatccgaaagtgattgccgaa
acagtggcctcgccactggagcaggaaattaacggtgtggaaaacatgctgtatatgtcc
tctcaggccacctcggatggtcgtatgacattgaccgtcacctttgccattggtaccgat
gtcaacctggcacaaacccaggtgcaaagtcgggttgaacgtgcaaaaccgcgcctgccg
caggaagtacagcgcttgggggtggtgacagagaaatcatcacccgacttaaccatggtg
gtgcatttaacctcaccggatgagcgttacgacatgctgtatctgtccaactatgccgcg
ctgaacgtcaaagacgagctggcgcgtattgaaggcgtgggttcggtgcaactgtttggt
gccggcgactacagtatgcggatctggctcgatccgaataaagtggcggcactgggctta
tcgccggcacaaattaccgctgccattcgtgagcagaaccagcaggcggcggccggcagt
ttgggcgcgcagccaagtggtgcggccgagtttcagctgctgatcaatgtcaaaggccgt
ttggcggcagtggaagagtttgaaaatatcattatcaaagtgggccagaacggtgaaatc
agccgcttaaaggatgtggctcgcctggagcttggcgcgtcaacctatgcgctgcgctcc
ttgctcaataacaaggaagcggttgccattccgattttccaggcctcgggctcgaatgcg
attcaaatctccgatgatgtacgcgccaaaatggccgagctggcaaaaagcttccccgat
gggctgagttacgacatcgtctacgacccaacggtattcgtgcgtggctcgattgaagcg
gtagtcaaaaccctgcttgaagccgtattgctcgtggtattggtggttgtgctgttttta
caaacctggcgcgcctctattattccgctggttgcggtacctgtatcgctggtcggtacc
tttgcctttatgcagctgatgggcttttcactcaacgccttgtcactgtttggcttggtg
ctcgccatcggtatcgtggtggatgacgccatcgtggtagtggaaaacgttgaacgcaat
atccgcgacggcttatcgccggtcgctgcgacacaaaaggccatgaaagaagtgaccggt
ccgattgtcgccacaacgttggtactggccgcggtgtttattccgacagcttttatgtca
ggattaaccggtcagttttataagcagtttgccctcaccattaccatttcaacctttatt
tcggccattaattcgttaacgctgagtccggcattgtcggcactgctgttaaaaggtcat
ggcgagaaaaaagatggcctgacccgcgccatggacaaattgctgggcggttggttattt
ggtccctttaaccgtttctttgcccgattgtccgcaggttacggttatctggtgcgcaaa
gtcatccgtttcggtgccattgtgggggtgttgtatatcgcactggtcggcttaacaggc
ttgcagtttgcgactacaccaacaggttatgttccggggcaggataaacagtacctggtg
gctttcgcccagctgccggatgcatcctcgctggaacgcactgatgctgtggtcaagcgc
atgtcgtctatcgcactggaccacctaggggtaatagatgcgattgcttttccggggctt
aatattaatggctttaccaacagccctaacagtgccgtgatatttgtcggactcgacagc
tttgaggttcgcgacagcgcagaattatcggccaatgcgattgccggcgcactgaaccag
aagtttgctgcaattgaagatgcctttattgctattttcccaccaccgccagtggcaggg
cttggcaccattggtggcttcagattacaaatccaggaccgggcaaaccttggctacgaa
gagctgtataaagtcaccatgcaggtaatgatgaaagcctggcaaacgcctgagctggcg
ggggtgttctccagttatcaggtgaatgtgccgcagctggatctggatatcgatcgaacc
aaagccaaacagcagggcgtggcactggatgaagtgttccagacgctgcaggcctatatg
ggctctgtgtatgtcaatgacttcaaccaatttggtcgtacctatcaggtcaatatgcag
gccgatgagcagttccgtcagacgccggagcaaattggtcagctgaaagtgcgtaataac
cagggcgaaatgatcccgctggcgtcatttatcaaggtgaccaacagcgcgggcccggat
cgggtgatgcactataacggctttactaccgccgaaatcaatggtggaccagcgccgggg
atcagcagtggtgaagcacaggctctgatggaaaaaattctggccgagactttgccaaac
ggcatgacctacgagtggacggaactcacctatcagcaaattttggctggtaacgccggc
atatttatctacccgctggtgatcttgttggtgtttatggtgctggctgcccagtatgaa
agcttacgtttaccgctggcgatcatcctgatcatcccgatgacgttgctatcggcgctg
agcggtgtgctgatttacggtggagacaacaacatctttacccagattggcctgattgta
ctggttggtttggcgaccaagaacgccattctgattgtcgagtttgccaaagagctgcaa
gaccacggcatgagcgcgctggaagccattctggaagctggccgcctgcgcttacgtccc
attctgatgacctccatcgcctttattatgggtgtggtgcctatggtgttctccagcggt
gccggcgcggaaatgcgccaggccatgggggtggcagtattcgccggtatgataggcgtg
acgattttcggcctgattttaacgccgctgttttactacttgttggcgaaaagaggcgag
acaaaggtaaaacaactggctaacggaaatgatgttgcggagggtgcccatgcgtaa
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