Shewanella litorisediminis: JQC75_10270
Help
Entry
JQC75_10270 CDS
T07182
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
slit
Shewanella litorisediminis
Pathway
slit00270
Cysteine and methionine metabolism
slit00450
Selenocompound metabolism
slit01100
Metabolic pathways
slit01110
Biosynthesis of secondary metabolites
slit01230
Biosynthesis of amino acids
Module
slit_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JQC75_10270
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
JQC75_10270
Enzymes [BR:
slit01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
JQC75_10270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QRH00295
LinkDB
All DBs
Position
2363529..2364734
Genome browser
AA seq
401 aa
AA seq
DB search
MSDKPMKTATKIVSLGREKKYSKGVINPPVFRASTIVFDTMDEMRHAAKNKHNGEMFYGR
RGTPTHFGFQAAIAELEGGAGTALYPSGAAAISASLLAFLQAGDHLLMVDSVYEPTRDLC
DKVLKGYGIETTYYDPLIGADIEALIRPNTRVLFVESPGSITMEVQDVPTIARIAHEHGL
VVILDNTWASPINSRPFELGVDISIQAATKYIVGHSDVMMGTATASAQYWDKLREHSYLL
GQTTSPDDVYLAARGLRTLGVRMAQHEKNALTVANWLKTRPEVDHLRHPAFEECPGHEFF
KRDFSASNGLFSFVLKRGTVEAVTAMVEGMSHFKMGFSWGGFESLILGVTGIHNIRSATR
WDSSKPLIRVHIGLEDPEDLIEDLSAGFARFNEVMARDAKE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaacccatgaaaaccgccacgaaaatcgtaagtcttggccgcgaaaagaaa
tacagcaaaggggtgatcaatccacccgtgtttcgcgcctccaccatagtgttcgacacc
atggacgaaatgcgccatgccgccaaaaacaaacacaatggggaaatgttttatggccgc
cgcggcaccccaacccattttggctttcaggccgccattgccgagcttgaaggcggtgcg
ggcaccgcgctttatcccagtggcgcggctgccatttcagccagcttattggcctttctt
caggcaggcgatcacctgctgatggtcgacagcgtgtacgaaccgacccgggatctgtgt
gacaaggtgctcaagggctacggtattgaaaccacctactacgatcccttgattggcgcc
gatattgaggccttaatccgccccaataccagggtgctctttgtcgagtccccgggctcc
atcaccatggaagttcaggatgtgcctaccatcgcccgcatcgcccatgaacacggcctg
gtggtgatcctcgacaatacctgggcgtcccccatcaacagccgccccttcgagctcggc
gtggatatttccattcaggcggccaccaaatacatcgtcggccactcagatgtgatgatg
ggcacggccaccgccagcgcgcaatactgggacaaactgcgtgagcacagttaccttctg
gggcaaaccacctcacccgatgacgtgtacctggcggcacgcggtcttcgcaccctgggc
gtgcgcatggcacagcacgaaaaaaatgcgctcaccgtggccaactggctcaagacccgc
ccggaagtcgaccacctgcgccatcccgcatttgaagaatgtcccggccatgagtttttc
aaacgggacttttctgccagtaacgggctcttttccttcgtgttaaagcgagggacggtg
gaggctgtcaccgccatggtcgaaggcatgagccactttaagatgggcttttcctggggc
ggttttgagagccttatccttggagtaaccgggatacacaacattcgttcggccacccgc
tgggacagcagcaaaccccttattcgtgtgcacatcggtctggaagacccggaagatttg
attgaggatctcagcgccgggtttgcgcgtttcaatgaggttatggcccgggacgcgaaa
gagtaa
DBGET
integrated database retrieval system