Shewanella litorisediminis: JQC75_11175
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Entry
JQC75_11175 CDS
T07182
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slit
Shewanella litorisediminis
Pathway
slit01501
beta-Lactam resistance
slit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JQC75_11175
01503 Cationic antimicrobial peptide (CAMP) resistance
JQC75_11175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slit03036
]
JQC75_11175
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_11175
01504 Antimicrobial resistance genes [BR:
slit01504
]
JQC75_11175
Chromosome and associated proteins [BR:
slit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JQC75_11175
Transporters [BR:
slit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JQC75_11175
Antimicrobial resistance genes [BR:
slit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JQC75_11175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
FOG1-like_PR
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
QRH00457
LinkDB
All DBs
Position
2561504..2562499
Genome browser
AA seq
331 aa
AA seq
DB search
MTTFKQLLGLSLLAIGLSAHASQPLIVEHTEEDRYLTLDALIEPVQAATVSAQTSGRILK
IHFDVNDTVPAGAALLEITSKEQGATLAAAEADYARAIAVNTEAQATLKRYQDLFPKGAI
SRGTYDEAIARAKSSEQAVTAANAAIVRARESLSYTTVYAPFGGVLTERHVEQGETVNPG
QPLLSGFSADKMRAVMQVPGRYLDGLKTAGAVRVELADGRSIDSNDLTIFSFASPQSHSF
QVRIQLPDNANVQPGSWAKASFVQGKRRMLLVPQRAIVSRGELTGVYMMQGDKAVLTQVR
LGKQQGDRVQVLSGLNDGDIIAADAYAVNAR
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgacgactttcaaacagctcttgggactgtctcttctggccatcggcctgagtgcccat
gcaagccaacccctgatagtggaacacaccgaagaagacaggtatttaaccctggatgcc
ctgattgagcctgtacaggcagccactgtatcggcgcaaacctcaggccggatcctgaaa
atccatttcgatgtcaatgacactgtacccgccggtgctgccctgctggaaatcaccagc
aaggagcaaggcgccacgttggcagccgccgaagcagactacgcccgtgccattgccgta
aatacggaggcgcaggccaccctgaagcgctatcaggacctgttccccaagggcgccatt
tcccgtggcacatacgatgaagccatcgcccgtgccaagagcagcgagcaggccgtaaca
gccgccaatgcggccatagtgcgcgcccgcgaatccttaagttacaccactgtgtacgcg
ccctttggtggcgtacttaccgagcgacacgtggaacagggtgaaaccgtgaatcccggt
cagccactgctgtccggcttcagcgccgataaaatgcgtgccgtgatgcaggtgccgggc
cgttatctcgatggcttgaagaccgctggcgccgtcagggtggaactggccgatggtcgc
agcatcgacagtaacgacctgaccatcttcagctttgcttctccccaaagccacagcttc
caggtgcgaatccagttaccggacaatgccaacgtacaaccgggcagctgggccaaagcc
agttttgtacagggaaaacgccgtatgctgttggtgccccaaagggcgatagtgtcccgc
ggcgaactcaccggggtctatatgatgcagggtgataaggccgtgctcacccaggtacgc
cttggcaagcagcagggtgacagagttcaggtgctttccggcctgaatgatggtgacatc
attgccgccgatgcctacgccgtaaatgcccggtga
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