Shewanella litorisediminis: JQC75_18275
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Entry
JQC75_18275 CDS
T07182
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slit
Shewanella litorisediminis
Pathway
slit01501
beta-Lactam resistance
slit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JQC75_18275
01503 Cationic antimicrobial peptide (CAMP) resistance
JQC75_18275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slit03036
]
JQC75_18275
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_18275
01504 Antimicrobial resistance genes [BR:
slit01504
]
JQC75_18275
Chromosome and associated proteins [BR:
slit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JQC75_18275
Transporters [BR:
slit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JQC75_18275
Antimicrobial resistance genes [BR:
slit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JQC75_18275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
OEP
MalQ_N
RibLong
DUF5667
Motif
Other DBs
NCBI-ProteinID:
QRH01763
LinkDB
All DBs
Position
4108426..4109571
Genome browser
AA seq
381 aa
AA seq
DB search
MRQMLKIASAIGMVLWVTACQEDAQQAANQQQMPPMEVGTVQVTAAPQNIMVELPGRSRA
FLEAEVRPQVSGIIMERNFVEGREVKEGQSLYKIDDATYKATLESAKADLASAQASLASA
KARAARYEKLVKTNAISKQDFDEADAAYKEALARVKVAEAQLHTAEINLKYTQVQAPISG
RIGKSTVTPGALVTANQGQVLATIQQLDPINVDITQSSAQLLALKAKLRAGKLQAADNAE
VQLELEDGTTYEHKGKLQFAEVSVDENTGSVILRAEFPNPDNVLLPGMYVRAMLNTGVDP
NAILVPQKAITRNTRGEAVAMVVNAENKVEARTVTTAEVINHQWRITSGLQAGDKLIIEG
LQKIRPGAPVVAKPAGSTQAQ
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaatgttaaaaattgcctcggccataggcatggtcttgtgggtcaccgcctgc
caggaagatgcgcaacaagctgccaatcagcagcaaatgcctcccatggaagtcggcact
gtgcaggttactgctgcacctcaaaacatcatggttgaactgcccggccgcagccgcgcc
ttcctcgaagctgaggtccgccctcaggtctccggcatcatcatggagcgtaacttcgtt
gaaggtcgtgaagtaaaggaaggccagtcgctctacaaaatcgacgacgctacctataag
gccactctagagagcgccaaggccgatctggccagcgcacaggcgtcccttgccagtgcc
aaggcccgtgccgcccgttacgagaagctggtgaaaaccaatgccatctccaagcaggac
tttgacgaagccgacgccgcctacaaagaagccctcgcccgggtgaaggtggccgaagcc
cagctgcacaccgccgagattaacctcaagtacacccaggtgcaggcgcccatttccggc
cgcatcggcaagtcaaccgtgaccccgggagcgctggtgaccgccaatcagggacaagtg
ctggccaccattcagcagcttgaccccatcaatgtggacatcacccagtccagcgcccag
ctgctggccctcaaggccaagctgcgtgccggtaagttgcaggcggccgataacgccgaa
gtacaacttgagctggaagatggcaccacctacgagcacaagggcaaactgcaatttgcc
gaggtgagcgtggatgaaaacacgggttcagtgatactgcgtgccgaattccctaatcca
gacaatgtgttgctgccgggtatgtatgtgcgtgccatgctgaacaccggtgtggatccc
aatgccattctggtgccccaaaaagccattacccgtaatacccgtggtgaagcggtggcc
atggtggtgaacgccgagaacaaggttgaagcccgtaccgtgaccacagcggaagtcatc
aatcaccagtggcgcatcacctcaggtcttcaggccggtgacaaactcatcatcgaaggg
ctgcagaaaattcgtcccggcgcccccgtggtggccaagcctgccggttctactcaggca
cagtaa
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