Stenotrophomonas sp. LM091: BIZ42_03315
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Entry
BIZ42_03315 CDS
T04630
Name
(GenBank) RNA polymerase-binding protein DksA
KO
K06204
RNA polymerase-binding transcription factor
Organism
slm
Stenotrophomonas sp. LM091
Brite
KEGG Orthology (KO) [BR:
slm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
slm03000
]
BIZ42_03315
03021 Transcription machinery [BR:
slm03021
]
BIZ42_03315
03009 Ribosome biogenesis [BR:
slm03009
]
BIZ42_03315
Transcription factors [BR:
slm03000
]
Prokaryotic type
Other transcription factors
Others
BIZ42_03315
Transcription machinery [BR:
slm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription elongation factors
BIZ42_03315
Ribosome biogenesis [BR:
slm03009
]
Prokaryotic type
rRNA transcription factors
BIZ42_03315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DksA_CC
zf-dskA_traR
HC2
ApoLp-III
Motif
Other DBs
NCBI-ProteinID:
AOX61308
UniProt:
A0A1D8Y6X3
LinkDB
All DBs
Position
complement(747902..749173)
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AA seq
423 aa
AA seq
DB search
MAAKKTAKKAVKAAKKTAKPVVKKLAAKSVAKKPAAKPAGKPASKQPAARTAPVKKAASK
SPAKAVKKAVAKKPAAKTVVARKTVAKKVVAKKSTVAKPVATPAKRAAGKPVSKAPIKKT
AASKTAAEKTVTPAAAKPASKPAPAKKTAVKQAPATPVKASKTASKPVASKPAAKPVAAP
VVKSAPKPASPAPAKSVPAKSAAKPVTPPASAPAPVAATPASKAPQNKNPVPVSKSPAKT
PAKSESAPKPVSRPVGKVAVAVAARSAAPAPRTKVKVVEYKTDEATGRPILPDGYKPSAE
EEYMSPLQLEYFRQRLQHWRNDLVEESKQTIANLQEEVRDIGDEAERATRETENSLELRT
RDRYRKLIGKINSTLKRLEDGDYGFCVDTGEEIGLDRLEARLTAERTIDAQERWEHLQKQ
QGD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
gtggctgctaaaaaaactgcaaagaaggccgtcaaggccgccaagaaaaccgccaagcct
gttgtaaagaagttggcggccaagtccgttgccaagaagccggccgccaagccggcgggc
aagcctgcatccaaacaaccggctgccaggacggcacccgtcaagaaggcggccagcaag
tcgcccgccaaagccgtcaagaaggcggtcgccaagaagcctgctgccaagacggtggtg
gccaggaagaccgtcgccaagaaggtcgttgccaagaagtcgacggtcgccaagccggtt
gccacgcccgccaagcgcgcggcgggcaagccggtaagcaaggcgcccatcaagaaaacc
gctgccagcaagacggcggccgagaagaccgtgacgcctgctgccgccaaaccggcatcc
aagccggcaccggcgaagaagaccgcggtcaagcaggcaccggccacgccggtgaaggcc
agcaagaccgccagcaagcccgtggcatccaagccggccgccaagccggttgcagcaccc
gtagtgaagtccgcaccgaagccggcatcgccggccccggccaagtctgtcccggccaag
agcgcggccaaacctgtcacccctccggcctccgcgccggcgccggtcgcagccaccccc
gcctccaaggccccgcaaaacaagaatcccgtgcccgtttcgaaatcgcctgcaaaaacc
cccgccaagtccgagtccgcccccaagcccgtgtcccgcccggtcggcaaggtcgccgtt
gccgtggcagcgcgttcggccgccccggccccgcgcaccaaggtgaaggtggtggaatac
aagactgacgaagccaccggtcgtccgatcctgcccgacggttacaagccgagcgcggaa
gaggaatacatgagcccgctgcagctggagtacttccgccagcgcctgcagcactggcgc
aatgatctggtcgaggaatccaagcagaccatcgcgaatctgcaggaagaagtgcgtgat
atcggcgatgaggccgagcgcgccacccgtgagaccgagaactcgctggaactgcgtacc
cgtgatcgttaccgcaagctgatcggcaagatcaacagcacgctgaagcgtctggaagac
ggtgactacggtttctgcgtggataccggcgaagagatcggtctggatcgtctggaagcc
cgtttgaccgctgagcgcacgatcgatgcgcaggagcgttgggagcacctgcagaagcag
cagggcgactga
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