Staphylococcus lugdunensis N920143: SLUG_15040
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Entry
SLUG_15040 CDS
T01951
Symbol
odhA
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sln
Staphylococcus lugdunensis N920143
Pathway
sln00020
Citrate cycle (TCA cycle)
sln00785
Lipoic acid metabolism
sln01100
Metabolic pathways
sln01110
Biosynthesis of secondary metabolites
sln01120
Microbial metabolism in diverse environments
sln01200
Carbon metabolism
sln01210
2-Oxocarboxylic acid metabolism
Module
sln_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sln_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SLUG_15040 (odhA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SLUG_15040 (odhA)
Enzymes [BR:
sln01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
SLUG_15040 (odhA)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
CCB53990
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All DBs
Position
complement(1577665..1580472)
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AA seq
935 aa
AA seq
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MTKDKTDVTEAPVNFGANLGLMLDLYDDYLQDPSSVPDDLQVLFGTIKNGEAHTIAQPAT
DGSGDLTDDSTIKRVMRLIDNIRQYGHLLADIYPINPPKRTHLPKLTIEDFNLDKQTLEG
ITAGIVSDHFKDIYDNAYEAIKRMEQRYKGPIAFEYNHINNNKERTWLKRRIETPYKATL
NHDQKRHLFNTLAHVEGFEKYLHKNFVGAKRFSIEGVDTLVPMLQHTLRRAAEEEIQNIQ
IGMAHRGRLNVLTHVLEKPYEMMISEFMHTDPMKFLPEDGSLELTAGWTSDVKYHLGGVK
TTDTYGIQQRISLANNPSHLEIVAPVVIGKTRAAQDNTHGVGKPTTDYHQSMPIIIHGDA
AYPGQGINFETMNLSNLHGYSTGGTLHIITNNRIGFTTEPIDGRSTTYSSDVAKGYDVPI
LHVNADDVEATIEAIDIALEFRKEFHKDVVIDLVGYRRYGHNEMDEPSITNPVPYHNIRQ
HDSVELLYGKQLIDEGVISEDYMNETIERVHKEMRAAQDKIDKTDKMDDPEMARPSALQA
PLESKTASFSVEKLKEINDAMLSYPEGFHILKKLNKVLEKRREPFEKEEGLVDWAQAEQL
AFATILQDGTSIRLTGQDSERGTFSHRHAVLHDEETGDTYTPLHHVPHQKATFEVHNSPL
SEAAVVGFEYGYNVENKESFNIWEAQYGDFSNMAQMMFDNFMSSARAKWGERSGLTLFLP
HAFEGQGPEHSSARLERFLQLAAENNSTVVNLSSASNYFHLLRAQAASLGTQAMRPLVVM
SPKSLLRNKTVAQPIDKFTEGQFQPILTETYNPKKVKKVVLASGKMFVDLKEYLVKNPDE
QILLIAVERLYPFPEDEIKAIFDTLPHIESVCWVQEEPQNQGAWLYAYPHLKSITPEQIN
LSYHGRIKRAAPAEGDGEIHKLVQSNIIKSVLKRN
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaggataagacagatgttacagaagcacctgtaaactttggcgcaaatcttggt
ttaatgctggatttgtatgatgattatttgcaagatccatcatctgtgcctgatgattta
caagtgttattcggaacaataaaaaatggtgaagctcatactatagctcagccagccaca
gatgggagtggtgacttaacggatgatagcacaattaagcgagtaatgcgcttgattgat
aatattaggcagtatggccatttattagcagatatatatccgataaatcctcctaaaaga
acacatttacctaaattaacaatcgaggattttaatttagataaacaaactctagaaggt
ataacagcaggcattgtttcagatcattttaaagatatatatgataatgcctatgaagca
attaaacgtatggaacaacgttataaggggccaattgcttttgaatacaatcatataaat
aataataaagaacgtacgtggctaaaacgtcgaattgaaacgccgtataaagctacatta
aatcatgatcaaaaaaggcatttatttaatactctcgcacacgttgaaggttttgaaaaa
tatttgcataaaaactttgttggtgcaaaacgattttctattgaaggcgtggatacatta
gtgcccatgttgcagcatacattgagacgagcggctgaagaagaaattcagaatattcaa
attggcatggcacatcgaggtagattaaatgttttaacacatgtgctggaaaagccatat
gaaatgatgatatcggagtttatgcatactgatccaatgaagttcttacctgaagatggt
agcttagaattaactgctggatggacaagtgatgtgaaatatcatttaggcggagtcaaa
acaacggatacgtatggtattcagcaacgtatttcattagcgaataatccaagtcattta
gaaattgtagcaccggtagttattggaaaaacgagagcagcacaagataacacacatggc
gtaggaaaacctacgacagactatcatcaatctatgcctattattattcatggtgatgct
gcttacccaggtcaaggtattaactttgaaacaatgaacttaagcaatcttcacggttat
tccactggtggcacattgcacattattacaaataatagaattggctttacaacagaaccg
attgatggacgatctacaacatattcaagtgacgtagcgaaaggttatgacgttcctatt
ttacatgttaatgcggacgatgtggaagcaactattgaagctattgatattgcgcttgaa
tttagaaaggaatttcataaagacgttgttattgatttagtcggttatcgtcgctacgga
cataatgaaatggacgaaccatcaattacgaatccagtgccttatcataatattcgtcag
catgactcagtggaattattatatggcaaacaattaattgatgaaggtgttatctctgaa
gattatatgaatgaaacaattgaacgtgtgcataaagagatgcgtgcagcacaagataag
atcgataaaacagataaaatggatgaccctgaaatggctagaccaagtgcactacaagcg
ccattagaaagtaaaacagcatcattttcagttgaaaagttaaaagaaatcaacgatgcg
atgttatcttatccagagggatttcatatattaaaaaaattaaataaagtattagaaaag
cgtcgagaaccatttgagaaagaggaaggattagttgattgggctcaagcagagcaactt
gcatttgcgacaatactgcaagatgggacttcaatacgtttaactggacaagatagtgag
cgtggtacgttcagtcatcgccatgctgtattacatgatgaagaaactggagacacatac
acgccattacatcatgtgccacatcaaaaggcgacgtttgaagtccataattcgccactt
tctgaagcagcagtagttggatttgaatatggctataatgttgaaaataaagaaagtttt
aatatttgggaagcacaatatggagacttttcaaacatggcacaaatgatgtttgataat
tttatgtcaagcgcacgagcaaagtggggagaacgaagtggcctaacattatttttacca
catgcttttgaaggacaaggaccagaacattcatcagcacggctagaacgttttttacaa
ttagctgcagaaaataatagcactgtcgttaacctatcaagcgcaagtaattatttccat
ttattacgtgctcaagcagcaagcttaggaacacaagccatgagaccattggttgtaatg
tcaccaaaaagtttattgcgcaataaaacagtagcacaacctattgataaatttactgaa
gggcagttccaaccaattcttaccgagacttataatcctaaaaaagtgaaaaaagttgta
ctggcttctggaaaaatgtttgtcgatttgaaagaatatttggttaagaatccagatgaa
caaatattattaattgctgttgaacgtttatatccattcccagaagatgagataaaggca
atatttgatacattaccgcatatcgaaagtgtatgttgggtacaagaagaacctcaaaat
caaggtgcatggttatatgcatatccacatcttaaatctatcacaccagaacaaattaat
ttaagctatcatggaagaattaaacgcgcagctccggctgaaggtgatggtgaaattcat
aaacttgtgcaaagtaacattattaaaagtgtcttaaaacgaaactag
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