Staphylococcus lugdunensis N920143: SLUG_20960
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Entry
SLUG_20960 CDS
T01951
Name
(GenBank) putative radical activating enzyme
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
sln
Staphylococcus lugdunensis N920143
Pathway
sln00790
Folate biosynthesis
sln01100
Metabolic pathways
Module
sln_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
sln00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
SLUG_20960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sln03016
]
SLUG_20960
Enzymes [BR:
sln01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
SLUG_20960
Transfer RNA biogenesis [BR:
sln03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SLUG_20960
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
NCH1
Motif
Other DBs
NCBI-ProteinID:
CCB54619
LinkDB
All DBs
Position
2221516..2222232
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AA seq
238 aa
AA seq
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MAAKIPVLEIFGPTIQGEGRVIGRKTMFVRTAGCDYRCSWCDSAFTWDGSAKDQIQLMSA
TEIYEKLIEIGGDCFDHVTISGGNPALIKGIQDLVDLFETEHIATALETQGSKFQPWMTQ
INDLTISPKPPSSSMTPNLEVLDQVIAQCVPQSLNLKVVVFDDEDYAFAKMIHHRYPDIP
FYLQVGNPYLADDVANHTEKLLSRYEQLVEKVMHSNDMNRAYVLPQLHTLLWSNKKGV
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaaatacctgtattagaaatttttggccccacaattcaaggtgaaggccgt
gtcattggacgtaaaacgatgtttgttcgaactgctggatgtgattatcgctgtagttgg
tgcgattccgcatttacctgggatggcagtgcaaaagatcaaattcaattaatgagcgca
acagaaatttatgaaaaattaattgaaattggtggcgattgttttgatcatgtaacgata
tcaggaggtaatcctgcattaattaaaggtatacaagatcttgtcgatttatttgaaact
gagcatatcgcaactgctttagaaacacaaggtagtaaattccaaccttggatgacacag
attaatgatttgacgataagtcctaaaccacctagctcttcaatgacacctaatttagaa
gttttagatcaagtcattgcacaatgtgtgccacaatccttaaatttgaaagtggttgtt
tttgatgatgaagattatgcttttgccaaaatgattcatcatcgttatccagacatacct
ttctatttgcaagtaggcaacccatacttagcagatgacgtagcaaatcacactgaaaaa
ctattgtcacgatatgaacaattggttgaaaaagtaatgcatagcaatgatatgaatcgc
gcttatgtcttaccacaacttcatacattattatggagcaacaaaaaaggtgtttaa
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