Shewanella loihica: Shew_1177
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Entry
Shew_1177 CDS
T00489
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slo
Shewanella loihica
Pathway
slo01501
beta-Lactam resistance
slo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shew_1177
01503 Cationic antimicrobial peptide (CAMP) resistance
Shew_1177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slo03036
]
Shew_1177
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_1177
01504 Antimicrobial resistance genes [BR:
slo01504
]
Shew_1177
Chromosome and associated proteins [BR:
slo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Shew_1177
Transporters [BR:
slo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Shew_1177
Antimicrobial resistance genes [BR:
slo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shew_1177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
ABO23047
UniProt:
A3QC49
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All DBs
Position
1361267..1362520
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AA seq
417 aa
AA seq
DB search
MDKKYLYIPLGVLALAALLTFAVAANQAKSQSPTYQPQVVKGKAANGKAANANTANVKAG
ARAVPIASARVEAHEVAQHLSLVGKLAANRSVQIAAEVSGKVQAINLSDNQAVSQGQVLV
HLEDAKAKANLAEAKAYLNDERRKLGEYKRLIKQHAITQTEIDAQLASVDIAEARLQAAQ
ADLDYHTLKAPFDGVIGLVDFSLGKLVSVGSELVSLDDLSSMRLDLQIPERYLSQIYLGM
PVVASSSAWPGEQFHGQVVAMAPRINSETLNLKVRVNFDNPSLQLRPGMLISARLDFAPV
TQAVVPVQALEYSGTKRFVYVIDSDNIARRTQVTLGARIDDQVLIDDGLSLGDRIVVKGL
VNMRDGIKVEDVETGQLAEGLGGRRLTQTQTQTQTQVQTQVQTQVQTGETETARGQS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaatacctgtacattccccttggcgtgctggcgctagccgccttgctcacc
tttgccgttgctgccaatcaggccaagagccagtcgccaacatatcagccccaagttgta
aagggcaaagctgctaacggcaaagctgctaatgccaacacagctaatgtcaaagctggg
gccagagccgtgccgattgccagtgcccgggtcgaggcccatgaagtggctcagcatctc
tctttggtcggcaagcttgccgccaatcgctcggtgcagatagctgccgaggtatcgggt
aaggtgcaggcgatcaacttaagcgataatcaggcggtgtctcaggggcaggtattggtg
catctcgaagatgccaaggccaaggcaaatcttgcagaggccaaggcctatctgaacgat
gagcggcgcaagttaggcgagtacaagcggctgataaaacagcacgctattactcagacc
gagatagatgctcagctggccagcgtcgatatcgccgaggccaggctgcaggccgcccag
gcggacctggattatcacaccctcaaggcccccttcgacggtgtgattgggctggtggac
tttagtctgggcaagctggtgagcgtgggcagcgagctggtaagcctggacgatctctcc
agcatgcgtctggatctgcagatccccgagcgttatctgtcgcagatctacctaggcatg
cctgtggtggccagcagcagtgcctggccaggcgagcagtttcatggtcaggtggtggcc
atggcgccgcggatcaactccgagaccctcaatcttaaggtgagggtgaatttcgacaac
cccagccttcagctcaggcccggcatgttgatctcggcgcggcttgattttgcccctgtg
actcaggcggtagtgccggttcaggcgctggaatactcaggcaccaaacgtttcgtctat
gtgatcgacagcgacaatatcgcccgccgcactcaggtgaccctgggggcgcgtatcgac
gatcaggtgctgatcgatgatggcttatccttgggcgacagaatcgtggtcaaggggctg
gttaacatgcgtgatggcatcaaggtggaagatgttgaaaccggccagctcgccgagggg
ctgggaggcaggcgtttgactcagacccagacccagactcagactcaggtccagactcag
gtccagactcaggtccagacgggcgagactgaaaccgcgcgggggcagagctaa
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