Shewanella loihica: Shew_1649
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Entry
Shew_1649 CDS
T00489
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slo
Shewanella loihica
Pathway
slo01501
beta-Lactam resistance
slo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shew_1649
01503 Cationic antimicrobial peptide (CAMP) resistance
Shew_1649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slo03036
]
Shew_1649
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_1649
01504 Antimicrobial resistance genes [BR:
slo01504
]
Shew_1649
Chromosome and associated proteins [BR:
slo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Shew_1649
Transporters [BR:
slo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Shew_1649
Antimicrobial resistance genes [BR:
slo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shew_1649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
BBP2
NQRA_N
Motif
Other DBs
NCBI-ProteinID:
ABO23516
UniProt:
A3QDG8
LinkDB
All DBs
Position
complement(1895318..1896382)
Genome browser
AA seq
354 aa
AA seq
DB search
MESFSKFKLALPLLFVAVLSACGNEETKKEEEKYAVPVETTTVIQGDVSSFYSTTATLEA
PQEADVVSRIAGLIESIKVEEGDRVSKGQLLAVIDAKRQRYDLARSQAEVEIIEQELNRL
KKMSNKEFISADSMAKLEYNLQAAIAKRDLAALQVQESMVRSPIDGVVAKRYVKAGNMAK
EFEQLFYVVNQDELYGIVHLPEAQLQSLRLGQEAELYANKHTKDTIHAKVLRISPIVDPQ
SGTFKVTLSVPNQNAQLKAGMFTRVELRYDTHSNVITVPYNAVVNQDNQYALYVVQGDNA
LRREVALGYREADTVEVVSGLEPGEQIVIRGQQNLKDQSLVEVISQLDVARAQQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggaatctttttcaaagtttaagttggcacttcccctactatttgttgccgtactcagt
gcatgtggtaatgaggaaacaaagaaagaagaagaaaagtacgccgttcccgttgaaacg
acgactgtcatacaaggtgatgtctcctctttttatagcactaccgcaaccctggaagcc
cctcaggaagccgacgttgttagccgcatcgctggtcttatcgaatccattaaagtcgaa
gaaggggatcgcgtctccaaggggcaattgctagcagtaatcgatgctaagcgccagcgc
tacgatctggcccgctcacaggccgaagtggaaatcatcgagcaggagctcaaccgtttg
aagaagatgagcaataaagagttcatcagcgccgattccatggccaaactcgaatacaac
ctacaggccgccatcgccaagcgcgatttagccgccctacaggtacaagaaagcatggtt
cgctcccctatcgatggcgtggtggccaagcgttatgtgaaagctggtaacatggccaaa
gagtttgagcagcttttctatgtggttaatcaagacgagctgtacggcatagtgcacttg
ccagaggctcagctacagagcctgcgtctaggccaggaggccgagctgtacgccaacaag
cacaccaaggataccattcatgccaaggtgctgcgtataagccccatcgtcgatccccaa
agcggtacctttaaggtcaccctttcggtgcctaaccaaaatgcccagcttaaggcgggg
atgtttacccgagttgagctgagatacgacacccacagcaatgtaataaccgttccctat
aacgccgtggtcaatcaggacaatcaatacgccctgtatgtcgttcaaggtgacaatgcc
ctgcgccgcgaagttgccctgggttatcgcgaggccgataccgtagaggtggtctcaggg
ctagaacccggtgagcaaatagtgatccgcggacaacaaaacctgaaagatcaatcctta
gttgaagtgatcagccaactagacgttgctcgcgcacaacaataa
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