Shewanella loihica: Shew_2439
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Entry
Shew_2439 CDS
T00489
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slo
Shewanella loihica
Pathway
slo01501
beta-Lactam resistance
slo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Shew_2439
01503 Cationic antimicrobial peptide (CAMP) resistance
Shew_2439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slo03036
]
Shew_2439
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slo02000
]
Shew_2439
01504 Antimicrobial resistance genes [BR:
slo01504
]
Shew_2439
Chromosome and associated proteins [BR:
slo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Shew_2439
Transporters [BR:
slo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Shew_2439
Antimicrobial resistance genes [BR:
slo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Shew_2439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
Herpes_UL21
NQRA_N
DUF6827
Motif
Other DBs
NCBI-ProteinID:
ABO24305
UniProt:
A3QFQ7
LinkDB
All DBs
Position
2866545..2867561
Genome browser
AA seq
338 aa
AA seq
DB search
MQVQHTLSIGILLSLVSLVSGASELPTMTVAKHSQPQWITLDAQLEAVKSATVSAQTSGR
IIKINYDVNDIVPQGASLLEITSKAQGAELAAAEADFARAQAQNEEAQKQRKRYEQLFPQ
GAISQGDMDQAIANARASAQAVSAARARIIQANESLQYTTVSAPFAGVVTKRHVEVGETV
SPGQALLSGFATEHMRAVTHVPLRYIDALRANPKMKLVLTNGKELESDALTIFSFADAKS
HSYKTRIDLPPQEPNLMPGMWVKASFNAGDRNTLTIPESAVIYNNELSAVYLMQNNQFML
NQVRLGNKQGDSFEVLSGLSDGDTIAVDAYQVLLKLKQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtacaacacacactttccatcggcatattgctgtcactcgtcagcctggtatct
ggcgccagcgaactgcccaccatgacggtggccaaacactctcagccccagtggatcacc
ttagatgcacaacttgaggcggtaaaatcggcgacggtgtcggcgcaaacctcgggccgc
atcatcaagatcaactatgacgtcaacgatatcgtgccccagggcgcatccttgctggag
atcaccagcaaggcccagggcgccgagctggcggccgccgaggccgactttgctcgcgcc
caggcccaaaacgaagaggcgcagaaacagcgtaagcgttatgaacagctgttcccccaa
ggcgccatctcccaaggcgatatggatcaagccatcgccaacgcccgcgcctcggcccag
gccgtcagcgctgcgagagcccgtatcatccaggccaacgagtctctgcagtacaccacg
gtcagtgccccctttgccggcgtggtcaccaagcgccatgtggaagtgggcgaaaccgtg
tctcccggccaggcactgctgagcggctttgccaccgagcatatgcgtgccgtcacccat
gtgcccctgcgttacatagatgcgctgcgcgccaatcctaagatgaagcttgtgctgacc
aacggcaaggagctcgaatcggacgccctgaccatcttctctttcgccgatgccaagagc
cacagctataagacacgtatcgacctgccaccgcaggagcccaacctgatgccgggcatg
tgggtcaaggccagcttcaacgccggcgatcgcaatacgctgaccatccccgagtctgcg
gtgatctacaacaacgaactgagtgcggtctatctgatgcagaacaatcagttcatgctc
aatcaggtgcgcctgggcaataaacagggcgatagcttcgaggtgctttcgggcctgagt
gatggcgacaccatcgccgtcgacgcctatcaagtgctgctgaagctgaaacaatag
DBGET
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