Syntrophothermus lipocalidus: Slip_1957
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Entry
Slip_1957 CDS
T01253
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp01501
beta-Lactam resistance
slp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Slip_1957
01503 Cationic antimicrobial peptide (CAMP) resistance
Slip_1957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slp03036
]
Slip_1957
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slp02000
]
Slip_1957
01504 Antimicrobial resistance genes [BR:
slp01504
]
Slip_1957
Chromosome and associated proteins [BR:
slp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Slip_1957
Transporters [BR:
slp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slip_1957
Antimicrobial resistance genes [BR:
slp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Slip_1957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
RND-MFP_C
HH_AprE
CzcB_C
BSH_CzcB
Biotin_lipoyl
BSH_RND
BSH_YknX
HH_MFP_RND
Beta-barrel_YknX
Beta-barrel_RND
BSH_CusB
HH_EMRA
HH_CzcB
Beta-barrel_AprE
HH_YBHG
CATRA-C
DUF3584
LcnD_C
GpP-like_1st
Phage_spike
Motif
Other DBs
NCBI-ProteinID:
ADI02709
UniProt:
D7CPT1
LinkDB
All DBs
Position
complement(2003761..2004921)
Genome browser
AA seq
386 aa
AA seq
DB search
MWERVRKVLAGLVVLVLLGTGAAGCGNKKEEAVEPAQIPVQVEKARLADVEKIAVYSGTL
RGVEEAVAYPKLSAAAGAVKVVEVMVKPGDRVSQGQTLIRLDSGDLEYQIRAYEAQLAGL
VAQREGAQVRLSNLKQTLDRTRFLYDQGAVSKSDLERAETEYEAAVAGLKQIDAGIAGAQ
ANLDNARRNLANCNVPSPVGGTVGTVNVSAGDSVTAQTPVTVVSNTSRLEVQVNVAEAEI
SYVKPGAQVKVYVQAASPEPFTGTVDTVATTADSRMKTYPVKILLDNPKGMLKSGMFAEV
HLPTMVRHQVVAVPQEAVVAKGARRVVYVVDSKSVAHERPVTVGVENENLAEITEGLKAG
EPVVVKGSTLIRDGDKVKVVAGGVDK
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
ttgtgggagagggttaggaaggtcttggccgggctggtagtgctggttcttttaggcaca
ggagcagccggctgcggcaataaaaaagaagaggcggtcgagccggcccagattccggtt
caggtagaaaaagccaggctggccgatgtggagaagatagcggtatacagcggaaccttg
aggggagtagaggaagctgtcgcctaccccaagctctcggcggcagccggggcagtgaag
gtagtcgaagtcatggtcaagccgggggaccgggtgtcgcagggccagaccctgatccgg
cttgattccggtgacttggagtaccagatccgggcctacgaggcgcagctggcagggctc
gtggctcagagggaaggggcccaggttcggctgtcgaatctgaagcagaccctggatcga
accaggtttttgtatgatcagggggctgtgtccaagtctgacctggaaagggctgagacc
gagtacgaagcggcggtggcgggtttgaaacagatcgacgccggcatcgctggggcccag
gctaacctggacaacgcccgccgcaacctggccaactgcaacgtgccgtctcccgtaggc
ggtaccgtgggaacggtcaatgtaagcgctggagacagcgtgacagcccagaccccggtg
acggtcgtctcgaacacgtcccggctcgaggtccaggtgaacgtggccgaagccgagata
agctatgtcaagcccggagcccaggttaaggtttacgtgcaggcggcatcgccggagccg
ttcacgggaacggttgacacggtggctacgacggcggacagccgcatgaagacatacccg
gtcaagatcctgctcgacaacccgaaaggaatgctaaagtcagggatgtttgccgaggtg
cacctgccgaccatggtcaggcaccaggtagtggcggttccccaggaggcagtcgtggcc
aagggagcccgccgggtggtgtacgtggtggactcgaagagcgtggcccatgagagaccc
gtaaccgtaggggtggagaacgagaacctggccgagattacggaagggctcaaagctggc
gagccggttgtggtaaagggatcgaccctcatccgtgacggggataaggtaaaggttgtg
gcaggaggcgttgacaagtga
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