Sideroxydans lithotrophicus: Slit_2001
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Entry
Slit_2001 CDS
T01196
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt01501
beta-Lactam resistance
slt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Slit_2001
01503 Cationic antimicrobial peptide (CAMP) resistance
Slit_2001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slt02000
]
Slit_2001
01504 Antimicrobial resistance genes [BR:
slt01504
]
Slit_2001
Transporters [BR:
slt02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Slit_2001
Antimicrobial resistance genes [BR:
slt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Slit_2001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
ADE12229
UniProt:
D5CTR7
LinkDB
All DBs
Position
complement(2014971..2018117)
Genome browser
AA seq
1048 aa
AA seq
DB search
MLPRFFIDRPIFAWVIALIILLSGILALRNLPVASYPSVAPPALAITLSYPGASAQVVEQ
TAVALVEQELNGIEHLLYMDSSSEQGRGTITLTFEADTDLDVASVETQNRVKRAEARLPD
EVRRAGITVAKSARNYLMFIALISPDKSRDNVALGSYMAANILENIQRVPGVGEAVLFGT
EYSMRLWLKPERLQAYNLSPGDVSAAVRAQNTQLATGELGDLPAEPRQQLNAVIVTKSRL
STPEEFGNIIVRANPDGSTVRVKDVARVELGAQDYSIAARIDGQPASAIAIRLSPSANAL
DTAKAVKDKMTELAKYFPKGIDWLVPYDTSKFVEISIHEVVKTLGEAMVLVFIVIYLFLG
NLRATFIPAIVVPVALVGGLVGLYAVGYSINTLTLFAMVLAVGIVVDDAIVVVENVERIM
TEEGLSPRDATRKAMGQIFGAIIAITLVLCAVFVPMTFFGGSVGAIYRQFAVTLILTILF
SVLMALTLTPALCAVLLKNDAGHEMVPTKGFLGWFNRFFARTSQRYRSGVDGVLKRTGRY
MLLYAALLGGLGWLFMHLPSSFLPEEDQGYFINMIQLPPGATRERSQEVLKQVEQFYLKQ
PEVEHVIGVLGFSFFGRGQNAALAFVRLKDWDKRPNPNSSAPALVKRANMMLFRIKQAFI
FAVNVPPIPELAAVGGFDFRLQDRSGQGRAKLLEARNMALGMASKSPVLVGVRPEGQEPG
PQLLIDIDRLKARALGIDIANLNDTLQSVLGVAYINDFVRQGRILRVQMQAEARTRSTPQ
EILQIPVRNLQGGMVTLSEFAKARWIVDLPKLDRYNGLPAMKIAGSAAPGRSSGEAMAAM
EEIAAKLPPGFGFEWSGTSREERLSGNQAPFLFGLSVVAVFLCLAALYESWSIPVAVILV
VPIGILGALSAVYMRGLTNDVYFKVGLIVIIGLAAKNAILIIQFALDLQRRGHDLLEATL
EASRLRFRPILMTSIAFVLGVMPLVISTGAGANGRHAIGTGVMGGMISATVLAVFFVPVF
FVVIRRLFPGNPGHLAEDKREDEGGKHE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaagattcttcatcgaccgccccattttcgcctgggtcatcgccctcatcatt
ctgctgagcggcattttggcattgcgcaacctgccggtcgcatcgtatccgtcggtggca
cctcccgcattggcgatcacgctcagttatcccggcgcttcggcgcaggtggttgagcag
actgcagttgcactggtcgagcaggagctgaacggtatcgagcacctgctctatatggac
tcgtcttccgagcagggacgcggcaccatcacgctgactttcgaggccgacaccgatctc
gacgtggcttcggtcgaaacacagaaccgcgtcaagcgcgccgaagcgcgcctgccggac
gaagtgcgccgggcgggcatcaccgtggcaaagtcggcgcgcaattacctgatgttcatc
gcactcatctcgccggacaaaagccgcgacaacgtcgcactcggcagctatatggcagcc
aacatactggagaatatccagcgtgtgcctggcgtaggcgaggcggtattgttcggtacc
gaatattccatgcggctgtggctgaagccggaaagactgcaggcatacaacctttccccg
ggcgatgtcagcgcggcggtgcgtgcccagaatacccagttggcgacaggtgagctcggc
gacttgcctgccgaaccgcgccagcagctgaatgcggtaatcgtcaccaagagccgcttg
tcgacgccggaagagttcggcaacatcatcgtgcgcgccaatcctgacggttccaccgtg
cgcgtcaaggatgtcgccagggtagaactgggtgcgcaggactattccattgcggcacgc
atcgacgggcaaccggcttcggcgattgcgatccgactgtctccttcggccaatgcgctg
gataccgccaaggcggtaaaggacaagatgacggaactggccaaatatttccccaaaggg
atagattggctggttccctacgacacctcgaagttcgtcgagatctcgatccacgaagtg
gtgaagacgctcggggaggcaatggtactggtgttcatcgtcatttacctgttcctgggt
aacctgcgtgcgaccttcatccccgccatcgttgtgccggtggctctggtcggcggtctg
gtgggattgtatgctgtcggctattcgatcaataccctgacgctgtttgccatggtgctg
gcggtcggtatcgtggttgacgatgccatcgtggtggtggagaacgtcgagcgcatcatg
actgaggaagggctctcgccgcgcgatgccacgcgcaaggccatggggcagatattcggc
gccatcatcgcgatcacgctggtgttgtgtgccgtgtttgttccgatgactttcttcggc
ggttccgtcggcgcgatctatcggcagttcgcagtcaccctgatcctgaccatcctgttc
tcggtgctcatggcattgaccctgacgccagcgttatgtgcggtactgctgaagaacgat
gcagggcatgagatggtgccgacgaaaggctttcttggctggttcaatcgtttcttcgcc
aggacgtctcaacgctacagatccggcgtggatggtgtattgaagcgcaccggtcgctat
atgttgctctacgcggctctgcttggggggctgggatggttgttcatgcatctgccgagc
agtttcctgccggaagaggatcagggctatttcatcaacatgatccagctgccgccgggt
gccacgcgggagcgctcgcaggaagtgctcaagcaggtggagcagttctatctcaagcag
ccggaggtggaacatgtcatcggcgtgcttggtttctctttcttcgggcgtgggcagaat
gccgcactcgctttcgtccggctcaaggactgggataaacggcccaatccgaacagttct
gcaccggcgcttgtgaaacgcgccaacatgatgctgttccgcatcaagcaggcattcatc
tttgccgtcaacgtgccgccgatacccgagctggcagccgtaggcgggttcgatttccgc
ttgcaggaccgctccggccaggggcgtgccaaattgctcgaagcgcgcaatatggcgctg
ggtatggccagcaagagcccggtactggtgggtgtgcggccggaagggcaggagccgggg
ccgcaactgctgatcgatatcgatcgtttgaaggcgcgcgcgttaggcatagacatcgcc
aatctgaacgataccttgcagtctgtgctgggtgtggcctacatcaacgacttcgtgcgt
caggggcgcatattgcgcgtgcagatgcaggccgaagcgcgcacacgttcgacgccgcag
gagattttgcagatcccggtaaggaatctgcagggtgggatggtgacgctgtccgaattt
gccaaggcgcgctggatcgtggatctgccgaagctggaccgctataacggcctgcctgcg
atgaagatcgccggcagcgctgcacctggtcgcagcagtggcgaagcgatggcggcgatg
gaggagatcgccgccaagttgccgccaggctttggttttgaatggtccggcacatccagg
gaagagcgtctttccggcaatcaggcgcctttccttttcgggctgtcggtcgtggccgtg
ttcctgtgcctggcggcgttatatgaaagctggtcgatcccggttgcagtcattctcgtt
gtgcccatcggtatcctgggggcactgtctgccgtttatatgcgcggcttgaccaacgat
gtctatttcaaggtcggcctgatcgtcatcatcggtcttgcggcgaagaatgcgatcctg
atcatccagttcgcactcgatctccagcgcagagggcatgatctgctggaggccacgctg
gaagcgagccgcctgagattccggcctatcctgatgacttccatcgcgtttgtgctgggc
gtgatgccgctggtcatctctacgggagcgggggcgaacggacgccatgccattggtacc
ggagtcatgggcggcatgatctccgcgaccgtattggcggtgttcttcgtgccggtgttc
tttgtcgtcatccgccgtctcttcccgggtaatccgggccatcttgcagaggacaagcgt
gaggatgagggaggcaaacatgagtag
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