Sideroxydans lithotrophicus: Slit_2002
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Entry
Slit_2002 CDS
T01196
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt01501
beta-Lactam resistance
slt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Slit_2002
01503 Cationic antimicrobial peptide (CAMP) resistance
Slit_2002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slt03036
]
Slit_2002
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slt02000
]
Slit_2002
01504 Antimicrobial resistance genes [BR:
slt01504
]
Slit_2002
Chromosome and associated proteins [BR:
slt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Slit_2002
Transporters [BR:
slt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Slit_2002
Antimicrobial resistance genes [BR:
slt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Slit_2002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
OEP
Biotin_lipoyl
YnfE
Motif
Other DBs
NCBI-ProteinID:
ADE12230
UniProt:
D5CTR8
LinkDB
All DBs
Position
complement(2018127..2019275)
Genome browser
AA seq
382 aa
AA seq
DB search
MKKRTNSLTAMTVLAAMFALSACDSKGGGGQAAAGNAPPPMEVDVVTVAAGSVVLTQDLP
GRLEAYKSAQVRARVEGIVEKRLFTEGSDVKAGATLFRIDARNYRTAYESAKSDLSVARQ
TVERYKPLLEAKAVSQQDFDLAEAKLKQAEAAMSRAQLDFDNTSVPAPIAGRIGRAQVTE
GALVGRGEATLLATIEQIDPIYANFTQPGTEVQRLQQLIKSGKMKPAESAKVELMLEDGS
VYPHSGKLLFSNLAVDASTGSVSIRAEFPNSGHELLPGMFVRIRFPEGSVDNTILVPQRA
VQMNPQGQFVMVVDAENKVAVRPVKAGDMSGENFIIEEGLKPGDQVIVNGLQKVRPGSPV
KAVEWNPEGNPPADAPAVPEKK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaacaaattccctgactgccatgaccgtccttgcggccatgttcgcactt
tccgcttgcgactcaaaaggggggggcgggcaggcagccgccggcaatgcccctcctccg
atggaggtagatgtagtgacggttgccgcgggttccgtggtgctgacccaggatctgcct
ggacgcctcgaggcatacaagagcgcacaggtacgcgcgcgggtcgaaggtatcgtcgaa
aagcggctgttcaccgaaggcagcgacgtgaaggcgggcgctaccttgttccggatcgat
gcgcgcaattaccgtactgcgtacgaatcagccaagtccgacttgagtgtggcacgccag
acagtcgagcgctacaagccgttgctcgaagccaaggcggtcagccagcaggatttcgac
ctggccgaggccaagctcaagcaggctgaagcagccatgtcgcgggcacaactcgatttc
gataacaccagtgtgcccgcacctatcgccgggcgcatagggcgggcgcaggtgaccgaa
ggggctctggtcggacgcggtgaagccaccttgcttgctaccatcgagcagatcgatccc
atctatgccaatttcacccagccgggaaccgaggtgcagcggctgcagcagctgatcaag
tccggcaagatgaagcccgccgagtcggcgaaggtggagctgatgctggaagatggcagc
gtctatccgcattccggcaagctgctgttctccaaccttgctgtcgatgccagcacgggc
agcgtttcgattcgtgcggaatttccgaattccggacacgaactgctgcccggcatgttc
gtgcgcatccgttttcccgagggtagcgtcgacaacaccattctggtgccgcagcgcgcg
gtacaaatgaatcctcaaggccagttcgtgatggtggtggatgctgaaaacaaagtcgca
gtccgaccggtcaaggcgggcgacatgtctggtgaaaacttcatcatcgaagaaggtttg
aagcccggcgaccaggtgatcgtcaatggcttgcagaaggttcgccccggttcgccggtg
aaagcagtcgagtggaatccggaaggaaatccaccggcggatgctcccgcagttcctgaa
aagaaatag
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