Sideroxydans lithotrophicus: Slit_2724
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Entry
Slit_2724 CDS
T01196
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
slt
Sideroxydans lithotrophicus
Pathway
slt00300
Lysine biosynthesis
slt00550
Peptidoglycan biosynthesis
slt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Slit_2724
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Slit_2724
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slt01011
]
Slit_2724
Enzymes [BR:
slt01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Slit_2724
Peptidoglycan biosynthesis and degradation proteins [BR:
slt01011
]
Precursor biosynthesis
Amino acid ligase
Slit_2724
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADE12949
UniProt:
D5CP28
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Position
complement(2756099..2757598)
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AA seq
499 aa
AA seq
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MNAFNPDGLKLLGVNVRHLVSDSRSVNRDDTFVAYPGSQADGRHFIAQAIERGANSVIWE
EHGFKWNPTWSVPNLAVSDLRHQAGLIADLVYGQPSQKLWMVGITGTNGKTSISHWLAKS
FGALGRKSALIGTLGNGFPEALRATANTTPDALIVHGLLAEYEQQGARAAVMEVSSHALT
QGRVNGVHFDVALLTNLTRDHLDFHGDMQSYAAAKKRLFDWASLKYAVLNLDDMFGAELA
EQLQDASVEVIGYGLNDDSLKMAERLGIRMVYGSLTQMDAQGLTLQLHTSWGAAALCSRL
IGSFNASNLLGALAVLLASEVRIDDAARELGLQKAVAGRMQTLGGKGLPTVVVDYAHTPD
ALDKVLTTVREVTESAGGKVICVFGCGGDRDRGKRPMMGTVASKLADVRIITSDNPRSEE
AAEIVSEIAAGMQGEYQVIEDRAKAITLAIANARHIDTVLLAGKGHENYQEIKGVRYPFS
DSEIAHRALSMWSTEEQRQ
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccttcaacccggatggattgaaattgctgggagtgaatgtcaggcatctggta
tccgacagcaggtcggtcaatcgcgacgataccttcgttgcctatcccggatcgcaggct
gacgggcgtcatttcattgcacaagccatcgaacggggcgccaactcggtcatctgggaa
gagcacggcttcaaatggaatccgacctggagtgtgccgaacctggcagtgagtgacttg
cgccatcaggccggcctgatcgcagacctggtctatggccagccttcgcagaagctctgg
atggtcgggatcaccggcacgaatggcaagacatcgatcagtcactggctggcaaagtcc
ttcggcgcactgggccgcaagagtgcattgatcggcacattgggcaacggttttccggaa
gcgctgcgagcaacggcaaacacgacgccggatgcattgatcgtgcacggactgctggcg
gaatacgagcaacagggcgcccgggccgcagtgatggaagtgtcttcgcatgcactcacg
caaggcagggtcaatggcgtgcatttcgacgtggcgctgctcacgaatctgacgcgcgac
cacctcgattttcacggcgacatgcaaagctatgcggcggcaaagaaacgcctgttcgac
tgggcatcgctcaagtatgccgtgctcaacctggacgacatgttcggtgccgagttggcc
gagcaattgcaggacgcgtccgtcgaagtgatcggctatggtttgaacgacgattcgctg
aagatggcggagcgtcttggaatacgcatggtgtatggcagcctcacgcaaatggatgca
caaggtcttacgttgcagctgcataccagctggggtgcagctgcactgtgcagcagattg
atagggagcttcaatgcttccaatctgcttggcgcgcttgcggtattgctggcaagcgag
gtcaggatagacgatgcggcgcgcgagctcggattgcagaaagcagtggcgggacgcatg
cagacactgggtggcaaaggcctgccgacagtcgtcgtggattacgctcacacgccagat
gctctggacaaggtgttgaccacggtgcgcgaggtgacggagtccgcgggcggcaaggtc
atctgcgtgttcggatgcggcggcgatcgagatcgcggcaagcggccgatgatgggaacc
gttgcgtcaaaactggccgatgtgcggatcatcaccagcgacaatccgcgcagcgaggag
gcggcggaaatagtcagcgagatcgccgcaggcatgcagggcgaatatcaggtgatcgag
gatcgcgccaaagccatcaccctggccatcgccaatgcacggcatatcgataccgtgctg
cttgcaggcaaggggcatgagaattaccaggagatcaaaggggtacgctatcccttctcg
gacagcgagatcgcccatcgggcgctgagcatgtggagcaccgaggagcagcggcaatga
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