Streptococcus lutetiensis: KE3_0682
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Entry
KE3_0682 CDS
T02775
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
slu
Streptococcus lutetiensis
Pathway
slu03030
DNA replication
slu03410
Base excision repair
slu03420
Nucleotide excision repair
slu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KE3_0682
03410 Base excision repair
KE3_0682
03420 Nucleotide excision repair
KE3_0682
03430 Mismatch repair
KE3_0682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slu03032
]
KE3_0682
03400 DNA repair and recombination proteins [BR:
slu03400
]
KE3_0682
Enzymes [BR:
slu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
KE3_0682
DNA replication proteins [BR:
slu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KE3_0682
DNA repair and recombination proteins [BR:
slu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
KE3_0682
NER (nucleotide excision repair)
GGR (global genome repair) factors
KE3_0682
MMR (mismatch excision repair)
DNA ligase
KE3_0682
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KE3_0682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
Nlig-Ia
PTCB-BRCT
5_3_exonuc
RNA_lig_T4_1
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
AGS05188
UniProt:
A0AB33AKM7
LinkDB
All DBs
Position
630715..632673
Genome browser
AA seq
652 aa
AA seq
DB search
MKERIQKLVDELNQYRKEYYTQDQPTVSDSEYDKLYRELVELEKSNPDLILPDSPTQAVG
GLILDGFEKYQHETPLYSLQDAFSREELDDFDRRVKSEFPNASYMAELKIDGLSVSLVYV
DGVLQVGATRGDGSIGENITENVKRIKDIPHKLEEPLTITVRGEAYLPRESFDKINEERR
ESGQSEFANPRNAAAGTLRQLNTAVVAKRNLATFLYQEVASTSMTTQNDVLEELSRYGFS
VNPKRITTSSMEDIWAFIQEVAAERDNLPYDIDGIVIKVNSLAMQKELGFTVKAPRWAIA
YKFPAEEKEAEILSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVDYIAEKDIRIG
DTVIVYKAGDIIPAVLHVVESKRDKQVPMPIPESCPSCGSELIHYEDEVALRCINPLCPS
QIQERLTHFASRDAMNITGLGPSIVKKLFTADLVHDVADIYRLSVEDLLTLDGFKEKSAE
KLYNAIQASKANSAEKLLFGLGIRHVGAKASRQLLEVFESIENLVAADEEAIANIDGLGT
VIAKSLCSYFAKKEAEELLAELKNAGVNFAYLGKKVSKDAQLAGLTVVLTGKLQRLTRNE
AKEKLQDLGAKVTGSVSKKTDIVVAGADAGSKLTKAQTLGIDVRDEAWLESL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacgtattcaaaaattggttgatgaactcaaccagtatcgaaaagagtattat
acacaagaccaaccaacggtctctgatagtgagtatgacaagctctatcgtgaattggta
gagcttgaaaagtctaatccagacttgattttgccggatagtccgacacaagcagttggg
ggtcttattttagatggctttgaaaaatatcaacatgaaacaccattgtatagtttacaa
gatgctttttcacgtgaggaattagatgattttgatcgtcgcgtcaagtcagaatttcca
aatgcatcttacatggctgagcttaagattgatggactttcagtatcattagtctacgta
gacggtgtacttcaagttggtgcaacacgtggtgatggttcaatcggtgaaaatatcact
gaaaatgtcaaacgcatcaaagacattccacacaaattggaagagcctttgacaatcacg
gttcgaggcgaagcttatttgccgagagaatcttttgataagattaacgaagaacgtcgg
gaaagtggtcagtcagaatttgccaatcctcgtaatgccgcagctggtacccttcgtcag
ttgaatactgcagtcgttgcaaaacgtaatctagcaaccttcttgtaccaagaagtggcg
tcaacaagtatgaccacacaaaatgacgttttagaagaattgtctcgttatggtttttca
gttaatccaaaacgcattacaacatcttcaatggaagatatctgggcatttattcaagaa
gtggctgcagagcgtgataaccttccgtatgatattgacggtattgttattaaggttaat
agccttgctatgcaaaaagaacttggatttacagttaaggcaccacgttgggcgattgct
tataaattcccagctgaagaaaaagaagctgagattttgtctgtagattggacggttgga
cgtacaggtgttgttacaccaacagctaatttgacaccggttcaactcgcaggaacaact
gttagtcgtgcgactttgcacaatgtggattatattgctgaaaaagatatccgaatcgga
gataccgtaattgtctacaaagcgggagatattattccagcggtgcttcacgtggttgaa
agtaagcgtgataagcaagtcccaatgccaattcctgaatcttgcccatcatgtggtagt
gagttgattcactatgaagatgaagtggcacttcgttgtatcaatccactttgtccaagc
cagattcaagaacgcctaacgcattttgctagtcgtgatgccatgaatatcactggttta
ggtccatcaatcgttaagaaactctttacagcagatttggttcatgacgttgcagacatt
tatcgactaagtgtcgaagatttactgacgctcgatggctttaaagaaaaatcagctgaa
aaactttacaatgctatccaagcatcaaaagctaattcagcagaaaaattattatttggt
ttaggaatccgtcatgttggtgctaaagcaagtcgtcagctcctagaagtttttgaaagt
atcgaaaaccttgtggcagcagacgaagaagctattgctaatattgatggtcttggaaca
gttattgctaagtcattgtgcagctattttgcaaaaaaagaagctgaagaactcttggca
gaattgaaaaatgctggtgttaattttgcttatcttggaaagaaagtttccaaagatgct
caattagctggtttgacagtggttctaactggaaaactccaacgcttaacgcgaaatgaa
gctaaagaaaagttgcaggatttaggagctaaggttacaggtagtgtttctaaaaagaca
gatattgtcgttgcaggagcagatgctggatcaaaattgacaaaagcccaaactcttggg
attgacgttcgtgatgaagcttggttagaaagtttataa
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