Sander lucioperca (pikeperch): 116040711
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Entry
116040711 CDS
T07345
Name
(RefSeq) vitamin D3 receptor A isoform X2
KO
K08539
vitamin D3 receptor
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sluc01009
]
116040711
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116040711
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sluc03310
]
116040711
Protein phosphatases and associated proteins [BR:
sluc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116040711
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116040711
Nuclear receptors [BR:
sluc03310
]
1. Thyroid hormone like
1I. Vitamin D3 like receptor
116040711
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
PCF11_charged
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
116040711
NCBI-ProteinID:
XP_031142147
Ensembl:
ENSSLUG00000022658
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All DBs
Position
12:13681600..13764137
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AA seq
420 aa
AA seq
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MEPMTVTTSVAGPDEFDRNAPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTC
PFNGSCTITKDNRRHCQACRLKRCIDIGMMKEFILTDEEVQRKKDMILKRKEEEAAREAM
RPRLNEEQARIISSLVEAHHKTYDASYSDFSRFRPPVREGPVTRSASRAASLHSLSEASS
DSFNHSPESVDTKMNFSNLLMMYQDGASSPDSSEEDTKLSMLPHLADLVSYSIQKVIGFA
KMIPGFRELTAEDQIALLKSSAIEIIMLRSNQSFSLEDMSWSCGGPDFKYCINDVTKAGH
SLDLLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHSRIEQLQDHLSETLQA
YIQVNHPGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGSEVS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatgacggtgacgacgtcggtggccgggccggacgagtttgaccgcaatgcc
ccgcggatctgcggtgtgtgcggtgacaaggccaccggctttcacttcaacgccatgacg
tgtgagggctgcaagggattcttcaggcgcagcatgaagcgtaaagcctccttcacctgt
ccattcaacgggagctgcaccatcaccaaggacaaccggcgtcactgccaggcctgtcgt
ctcaaacgctgcattgatattggcatgatgaaagagttcatcctgacagacgaggaggtt
cagaggaagaaggacatgatattgaagaggaaagaggaggaggcagcccgggaggcgatg
aggccacgtctgaatgaggagcaggcccggatcatctccagtctggtggaagctcaccac
aagacctacgatgcctcctattctgacttctcccgcttcaggcctccagtgcgtgaaggc
ccagtaacgcgcagtgccagcagagctgcctcccttcattccttgtctgaggcctcctct
gactcattcaaccactcacctgagtctgttgacaccaagatgaacttcagcaacctgtta
atgatgtaccaggacggcgctagcagtccagactctagtgaggaggacacaaagctttcc
atgctgccccacctggcggacctggtctcctacagcatccagaaagtcatcggctttgcc
aagatgatcccaggcttcagagagctgacagcagaagaccagatcgctctgttgaagtcg
agtgccattgagatcatcatgctgcgttcaaaccagtcgttcagtctggaggacatgtcc
tggagctgcggaggacctgacttcaaatactgcatcaatgacgttacaaaggctggtcac
tctctggatctgttggagccgctggtgaagttccaggttggtttgaagaaactcaacctg
cacgaggaggaacatgtgctgctcatggccatctgcctgctctccccagatcgtcctggt
gtccaagaccacagccgcatcgagcagctccaggaccatctgtcggagacactgcaggcc
tacatccaggtcaaccacccaggcggacgcctcctctacgccaagatgatccagaagttg
gccgacctgcgcagcctgaacgaggagcactccaagcagtatcgttcactctccttccag
cccgagcacagcatgcagctcaccccgctggtgctggaagtgtttggcagcgaggtgtca
tag
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