Sander lucioperca (pikeperch): 116040739
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Entry
116040739 CDS
T07345
Symbol
itchb
Name
(RefSeq) itchy E3 ubiquitin protein ligase b isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
sluc04144
Endocytosis
sluc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116040739 (itchb)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116040739 (itchb)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116040739 (itchb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116040739 (itchb)
04121 Ubiquitin system [BR:
sluc04121
]
116040739 (itchb)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116040739 (itchb)
Membrane trafficking [BR:
sluc04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116040739 (itchb)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
HECT type E3
116040739 (itchb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
116040739
NCBI-ProteinID:
XP_031142197
Ensembl:
ENSSLUG00000023025
LinkDB
All DBs
Position
12:complement(13583540..13613506)
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AA seq
889 aa
AA seq
DB search
MASGVTKSSTSNGLPMKAQLQIIVLSAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNT
HNPKWKQPLTVIVTPFSKLVFRVWSHQTLKSDVLLGMATLDVSDTLKSNDMTISEVVQTL
QLCADRDLSDVVGDLSVYLDGMTVDAEMFAAAEADHHSTSNGESSQPNGDHVIRRSRDSS
PAVDAVEHRSSPSGRRAANSTGSPSVSSGGSRPLRPPRPSRPPPPTPRRPTSSPAPSSNG
SAPADGSDGQSGSDTPVRTPASGPSPAPESSPSTGSDTNSTPASTSGAAATRQPASSITP
AVIPRVPAVNAVPLPPGWEQRVDQNGRLYFVDHVEKRTTWERPEPLPPGWERRVDQMGRV
YFVDHMTRTTTWQRPTMETVRNYEQWQHQRSQLQGAMQQFNQRFIFGLQDQGSATQNKDF
DPLGPLPHGWEKRTDTNGRVYFVHHSTRTTQWEDPRTQGVLNEKPLPEGWEMRFTVDGIP
YFVDHNRRTTTYIDPRTGKSSLENGPQITYVRDFKAKVQYFRFWCQQLSLPQHIKITVTR
KTLFEDSFQQIMSFNAQDLRRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEY
AGKDNYCLQINPASYINPDHLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLAL
KDLESIDEEFYNSLMWIKDNNIEECGLEMYFSVDKEILGEISTHELKPDGGDLPVTEENK
EEYIRLVAEWRMSRGVEEQTQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLADWQ
RNTIYRHYARSSKQIVWFWQFIKEMDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKF
CLEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtggagtcaccaagtcaagcacttccaacggtttacctatgaaggcacagcta
caaatcattgtgctatcagcaaaactaaaagagaacaagaaaaactggtttggtcccagt
ccttatgtggaagtgacagtcgacggccagtccaagaaaacagagaaatgcaacaacacc
cacaaccccaaatggaagcagccgctcactgtgattgtgactccattcagcaaactggtg
tttcgcgtctggagccaccagaccctgaagtcagacgtgttgctaggcatggccacgctg
gacgtcagtgacacgctcaagtctaacgacatgacaatctcggaggtggtgcagacctta
cagctgtgtgcagacagagacctgtcagatgtggttggtgacctgtctgtctacctggac
ggaatgacggtcgacgccgagatgttcgccgccgccgaggccgaccatcacagtacatca
aatggggagtcatcgcaacccaatggggatcatgtcataaggcggagtcgggacagctcc
cctgctgtggatgctgtagagcacaggtcttctcccagtggccggagggcagccaacagc
acagggtctccttcggtgtcatcagggggctcgaggcctctccgaccacccaggccctcc
agacctcctcctccaaccccacgcagacccacctcttcaccagcaccttccagtaatggc
tctgcgccagctgatggcagcgatggtcagtctggttctgatacaccagtgcgtacaccg
gcctcaggaccctcaccagccccagaatcaagtccatcgacaggctcagacacaaactcc
acaccggcctccacttctggagctgctgcaaccagacagccggccagcagcatcacccct
gctgtcatcccaagagtccccgctgtcaacgctgtgccattgccccctgggtgggagcag
agggtggatcagaacggcaggttgtattttgtcgatcacgtggaaaagagaacaacgtgg
gaacgccctgaaccactgcccccgggctgggaacgtcgtgtcgaccagatggggcgggtc
tactttgtcgatcacatgacgcgaaccaccacgtggcagcgtcccacaatggagacggtg
cgtaactacgagcagtggcagcaccagcgcagccagctacagggcgccatgcagcagttc
aaccagaggttcatatttgggctacaagaccagggttcagccactcagaataaggatttt
gatcctcttgggcctctgccacatggatgggagaagagaacagacacgaatggcagagtt
tattttgtacatcattctacgcggacaacacagtgggaggacccacgaacgcagggtgtg
ctgaatgagaagccacttccagagggctgggagatgaggttcactgtcgatggcataccc
tacttcgtagaccacaacaggagaacaaccacctacatcgaccctcgcactggaaaatcc
tcacttgaaaacggacctcagatcacctacgttcgagactttaaagccaaagtacagtac
ttcagattctggtgccagcaactgtcattgcctcaacacatcaagatcaccgtaaccaga
aaaaccctgtttgaggactccttccagcagataatgagcttcaacgctcaggatctgcgg
aggagactatggataatcttcccaggagaagaaggccttgactacggaggcgtggccagg
gagtggttcttcctgttgtcccatgaagttctgaaccccatgtactgcctgtttgaatat
gccggtaaagataactactgtctccagatcaaccctgcctcttacatcaacccggaccac
ctcaagtattttaagttcataggacgcttcattgccatggctcttttccatggcaaattc
atcgacactggtttctcactgccattttacaagcgcatcctaaacaagccattggccctc
aaagatctggagtcaatagacgaggagttctacaactccctcatgtggatcaaggataac
aacatcgaggagtgtgggctggagatgtacttctctgttgacaaagagatcctgggggaa
atctccacccacgagctgaaaccagatggaggagacctcccagtcactgaggagaacaag
gaggagtacatcagactggtagcagagtggaggatgtccagaggagtggaagagcagaca
caggctttctttgaaggcttcaacgaagtcctccctcagcagtacctgcagtactttgat
gctaaagagcttgaggtgatgctgtgtggtatgcaggagatcgaccttgcagactggcag
agaaacactatctacagacactacgctcgaagcagcaaacagatcgtctggttctggcag
tttataaaggagatggacaatgagaagaggatgaggctgctgcagtttgtcaccggtacc
tgtcgcctgcctgtaggaggctttgccgacctaatgggaagcaatggtccccagaagttc
tgccttgagaaggtggggaaagaaaactggcttcccagaagccacacgtgcttcaacaga
ctggacttgccaccctacaagagctacgagcaactgaaggagaagctgatgtttgccatc
gaggagacagaaggcttcggacaggagtga
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