Sander lucioperca (pikeperch): 116041066
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Entry
116041066 CDS
T07345
Symbol
zgc:103759
Name
(RefSeq) U8 snoRNA-decapping enzyme
KO
K16855
U8 snoRNA-decapping enzyme [EC:
3.6.1.62
3.6.1.64
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00230
Purine metabolism
sluc01100
Metabolic pathways
sluc01232
Nucleotide metabolism
sluc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
116041066 (zgc:103759)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116041066 (zgc:103759)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116041066 (zgc:103759)
Enzymes [BR:
sluc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
116041066 (zgc:103759)
3.6.1.64 inosine diphosphate phosphatase
116041066 (zgc:103759)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
116041066 (zgc:103759)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nudt16-like
NUDIX
Motif
Other DBs
NCBI-GeneID:
116041066
NCBI-ProteinID:
XP_031142765
Ensembl:
ENSSLUG00000019778
UniProt:
A0A8C9ZS98
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All DBs
Position
12:complement(15416582..15421564)
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AA seq
223 aa
AA seq
DB search
MASGQLSRAEALACSGCRHACHVMLYCDTKSQLFGRLPIRHIILMQMRFDGLLGFPGGFV
KPSEETLEAGLSRELLEELGVALPILVEDHADSCYAPASSHSSSSSSSSRLITHFYVKKM
EEEQIREVERAAASTATDHGQEVLGMVRVPLYTTKGGGGLAAFLSHSFIGNARSQLADSL
LRLNLVAPEELHKALTHSLKIHTQTAEDLQVAFALTEAKRKRF
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggacagctgtcgagggcggaggcgttggcgtgctcaggctgcaggcatgca
tgtcacgtgatgctctactgtgacacgaaaagtcagctgtttgggagacttcctatcaga
catatcatactgatgcagatgcgctttgacggtctgctgggtttccctggagggttcgtc
aaaccatcagaggagaccctggaggcggggcttagcagggagttgttggaggagctgggt
gtagctcttcctatattggtagaagatcatgcggactcttgctatgcccctgcttcctca
cactcctcctcctcctcctcgtcctcccgtcttatcactcacttctacgtgaagaagatg
gaggaggagcagattagggaggtggagagagcggctgcatccactgcaacagatcatgga
caggaggttctaggaatggtcagagtccctctgtacaccacgaaaggcgggggaggcctc
gcggctttcctgtcgcactcgttcattggtaatgctcgctcccagcttgccgactctctg
ctgcgtctcaacctggtcgcccctgaggagttgcataaagccctcacacactctctgaag
atacacacacaaaccgcagaggacctgcaagtggcctttgcgctaacagaggcaaagagg
aaacggttttaa
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