Sander lucioperca (pikeperch): 116042707
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Entry
116042707 CDS
T07345
Name
(RefSeq) platelet-derived growth factor subunit A-like isoform X1
KO
K04359
platelet-derived growth factor subunit A
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
sluc04510
Focal adhesion
sluc04540
Gap junction
sluc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116042707
04020 Calcium signaling pathway
116042707
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116042707
04540 Gap junction
116042707
09142 Cell motility
04810 Regulation of actin cytoskeleton
116042707
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sluc04052
]
116042707
00536 Glycosaminoglycan binding proteins [BR:
sluc00536
]
116042707
Cytokines and neuropeptides [BR:
sluc04052
]
Cytokines
Growth factors (RTK binding)
116042707
Glycosaminoglycan binding proteins [BR:
sluc00536
]
Heparan sulfate / Heparin
Growth factors/receptors
116042707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
Motif
Other DBs
NCBI-GeneID:
116042707
NCBI-ProteinID:
XP_031144877
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Position
4:complement(16620819..16634883)
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AA seq
199 aa
AA seq
DB search
MRAAVYHLLAGCLCLLRTAAEESPLPRELLERLSRSEIRSISDLQRLLEIDSVENEVIEE
TKHIYHKDFSHSIPDLKRAHTHTRRKRSTVVEEALPAVCKVRTAIYEIPRSQVDPTSANF
IIWPPCVEVRRCTGCCNTSNMRCQAARKHHRTVKVAKVEYVRRRPKLREVQVRLEDHLEC
MCTNKRHISPNSDTDNGIR
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgagagctgcggtataccacctcctcgccggctgcctctgcctgttacgtaccgctgct
gaggagtctcctctcccccgggagctgttggagcggctctcccgcagcgagatccgtagc
attagcgacctccagcggctgctagagatagactccgtagagaacgaggtgatcgaggag
accaaacacatctaccacaaggacttctctcacagcatccccgacctgaagagagcacac
acacacaccagacgcaagaggagcactgtggtggaggaggccttgccggcggtgtgtaag
gtgcggacagcgatctatgagatccccaggagccaggtggatcccacctcagccaacttc
atcatctggccgccctgcgtcgaggtgaggcgctgcaccggctgctgcaacaccagcaac
atgagatgccaggctgctcgcaagcaccaccgcacagtcaaggtggcgaaggtggagtac
gtgcgacggcgacccaagctgagggaggtgcaggtgaggctggaggatcacttggagtgc
atgtgcaccaacaaacggcacatcagcccaaactccgatacagacaatggcatcagatga
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