Sander lucioperca (pikeperch): 116042782
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Entry
116042782 CDS
T07345
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X2
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116042782 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116042782 (nthl1)
Enzymes [BR:
sluc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
116042782 (nthl1)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116042782 (nthl1)
Prokaryotic type
116042782 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
116042782
NCBI-ProteinID:
XP_031145010
Ensembl:
ENSSLUG00000013306
LinkDB
All DBs
Position
4:12451561..12458729
Genome browser
AA seq
413 aa
AA seq
DB search
MIQVRCSSSTRGYVVQCFAMTSPYFMQRSVITRSGGQNAGCVPADSLRSKLTNRSVDPVS
SVAVKVEEEEARIFEQRPSSAPFSTGSCHPKTETDTLPLSSHSRRRKQLKVEYDKDESVT
PVKIEHWESPDWKKQLECIREMRSSRDAPVDNMGAKTCYDTEAPAHVRRFQVLVSLMLSS
QTKDQVTAAAMQKLRAHGCTVENILTTDDEALGKLIYPVGFWRTKVKYLKLTSAMLQKEF
GGDIPDSVEGLVRLPGVGPKMAHLAMDIAWDQVSGIGVDTHVHRISNRLGWLKKPTKNPE
ETRKALEEWLPRELWSEINWLLVGFGQQVCLPVNPLCSVCLNQHSCPSAHKISPTKRPKA
GSPRSPNPTSSFTTKTEPEQESPVKHERTKREPLPAPVSPTAQRRRLKSKVKH
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgattcaagtccgctgcagcagcagcacgaggggctatgtagtccagtgttttgctatg
acttctccgtatttcatgcagaggtctgttatcactcggagtggtggtcaaaatgctggc
tgtgtacctgcggactctctcaggtccaaacttaccaacagaagtgtggatccagtttcc
tctgtggccgtgaaggtggaggaggaggaggcgaggatctttgagcaaagaccctcctct
gcccccttttcaacgggcagttgccatccaaaaacagaaacggacactttaccgttgtct
tcacatagccgcaggaggaaacagctaaaagtggaatatgacaaggatgaaagtgttaca
ccggtgaagatagaacactgggaatctcccgactggaagaaacagttagaatgcatccgt
gagatgaggagcagccgtgatgcacctgtagataacatgggagccaagacatgctacgac
acagaggctcctgcgcatgtgagacgtttccaggtgttagtttcactcatgctgtccagt
cagaccaaggaccaggtgacagccgcagccatgcagaagctccgagctcacggctgcact
gtagaaaatatactcactactgatgatgaagcactgggaaaactcatctaccctgtcggc
ttctggaggactaaggtgaagtatctgaaactgacatcggccatgctgcagaaagaattc
ggaggggacatcccagatagcgtggaggggctggttcgccttccaggagttggacctaag
atggctcacttggctatggacatcgcctgggaccaagtgtctggcattggcgtggacaca
catgtgcatcgtatctctaatcggctcggctggctcaagaaaccaaccaagaacccggaa
gaaacacgcaaggccctggaggaatggttacccagggagctgtggagtgagatcaactgg
cttctcgtgggtttcggacagcaggtttgtctccctgtcaaccctctctgctctgtgtgt
ctgaaccagcacagctgtccatccgcccacaaaatctctccaacaaagaggcctaaagct
ggatccccacggtctccaaatccaacatcttcctttacaacaaaaactgaaccagaacaa
gaatctcctgttaaacacgagaggacaaagagggagccactgcccgcacctgtttccccc
accgcacagagaaggaggctaaaaagcaaggttaaacattga
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