Sander lucioperca (pikeperch): 116044789
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Entry
116044789 CDS
T07345
Symbol
raph1b
Name
(RefSeq) ras-associated and pleckstrin homology domains-containing protein 1b isoform X1
KO
K23488
Ras-associated and pleckstrin homology domains-containing protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
116044789 (raph1b)
Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
116044789 (raph1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA_2
RA
PH
PI3K_rbd
PH_11
RBD
Motif
Other DBs
NCBI-GeneID:
116044789
NCBI-ProteinID:
XP_035854348
Ensembl:
ENSSLUG00000023307
LinkDB
All DBs
Position
24:complement(9273160..9311895)
Genome browser
AA seq
1578 aa
AA seq
DB search
MEQVSDDELDHGAEEDSDKEDQDLDKMFGAWLGELDKLTQSLDDGRPQKPLQKPPLRQET
NMANFSYRFSMYNINEALNQGDTVDLDALMADLCSIEQELNTISKPNSASRGQNKGQQRA
PGGRSASTKHTGTSGGGSSGGSTSSSTRASPANTVRGGSVNTRPTASNISLDDITSQLEK
ASLSMDEAARQTSSSSSSSSSSFSSTTLRRPSSGSSGGGQHRRTGSVGTVSEREAPSQRS
SVNSACASASSMDSLDIDKVMTGGEVEGQSSPSTQGQNQTSTEHVTLRRARRQLDFTSRE
GEVDRATHSYLDRETSLILKSIAGKPSHLLTKEEQAAKLKAEKIRVALEKIKEAQVKKLV
IRVHMSDESSKTMMVDERQTVRQVLDSLLDKSHCGYSPDWSLVETINELQMERIFEDHEN
LVENLLNWTRDSHNKLMFIERIEKYALFKNPQNYLLGRKETSEMADRNKEALLEECFCGG
SVSVPEIEGILWLKEDGKKSWKKRYFLLRASGIYYVPKGKAKASRDLVCFLQLDHVNVYY
GQDYRSKYKAPTDYCLALKHPQIQKKSQYIKYLCCDDVRTLHQWVNGIRIAKYGKQLYVN
YQEAMKRTEAAYDWSSLSTSSIRSGSSSASIHESQSNHSGHSDSGVDTGSSHGRSQSVVS
SIFSEAWKRGTQIEESSKHMRMEASRGATLPHASHSHRHHSQHSVDHPALTPPPQPQVQP
QPQPHQQHPHEHQPHQQHPPQHQHPSMHPQTPTQPQHQQLPPQHHSPQQAPQPPPQYPQR
PQQSPQSPQQQPQTISSYNHMPPQQQELAPPPPPPPPPPPPPPPPPPVQMVSHHSPAPTM
YKYSTITRLQNQKASQSANHHRLPNHLLALGQQVLPTASTLPAAPVPIKPNVNHIAARTN
VPPPPPPPPPPSMPTPGSAMAVLKLGPPSPATPPAFIPPPPAPPPAPQTNGVTFPPPPSP
PPPPPALAPMSQPVNPNGLKQALKERFPSPPRDLLSPNGGLEESPPPAPAPPPPPPPPPP
PPPPPPPPQHFPVPAQFPPPPAPPPAPPKTFTPGFVPHTAPKPVSPVSPFPPAPPPASLG
GPTPPPPPPPPPPAPLKKQFSLQTGHISGHPPPTLPKQHSLSKQTPYSTGAAPTMSLVKQ
LASQFPGAPSQVANHTESPKAPLSPPAVKTKPKWQPGGGQQLQSPEFPPPPPDSNIGFPA
PPPPPPPPAPVTGPTPPPPPPPPPPPVTGPTPPPPPPPPPPPVTGPTPPPPPPPPPAPVT
GPTPPPPPLPPGNLGSPLRRSPSGSSNFVGKKPPPTPQRNTSVKFNASTSYEESRRNLFS
KFAPQNNAASSSPCPTASSTGSPSKDPSAGPPAPPKPGKLNLANLPMALQAKVSQVKQTG
GGFPTPPHECAYFPPPPPASELFPPPLPPGSDTHSGGPPRVAVVNPQPQAPPPPPPVCLV
SNSSWGKSSLKKTPPPTLVRRNNTTPEPPPLSPPPPTSPKGSSGQPNFLEDLNRTLKRKS
VGRQSSLNSAGLMDKLDPAGTMDDMALPPPPPELLLDQGKQSNGGNGGYMSGNISGYATL
RRGPPPAPPKRGDTTKLT
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggtgtcagatgatgagttggaccatggagccgaggaggacagcgacaaggag
gaccaggacctggacaagatgttcggtgcttggcttggcgagctggacaagcttacacag
agtctggatgatggcaggcctcagaaaccactgcagaagcctcctctcaggcaggagacg
aacatggccaacttctcctaccgcttctcaatgtataacatcaacgaggcgttgaaccag
ggcgacacagtggacctggatgccctgatggctgacctgtgctccattgaacaggagctc
aataccatttccaaaccaaactctgcgtctcgtggccagaacaaaggccagcagcgagcc
ccgggggggcgcagtgccagcaccaagcacacaggcaccagtggaggaggaagcagcgga
ggaagcaccagtagcagtacccgggcatcgccggccaacaccgtacgaggcggcagcgtc
aacacccgccccacggcttccaacatctccctggatgacatcacctctcagctggagaag
gcctctctcagcatggatgaagcggcacgtcagacctcttcctcttcctcctcctcctcg
tcttctttctcctccaccacactgcggcggccctcgtcggggtcgtcaggcggcgggcag
cacaggaggacgggctcagtgggcacagtcagcgagcgggaggctccatcccagcggtcc
agtgtaaactcagcgtgtgcctcagcatccagcatggactccctggacattgataaagtg
atgacgggtggagaggtggaaggccagagcagcccgagcacacaaggacaaaaccagacc
agcacagagcatgtcacactgcggcgggccagacggcagcttgactttacctcacgagag
ggtgaagtggatcgggccactcactcctatctggaccgagaaacctcgctcattctgaaa
agcatagcaggaaagccttctcacctcctgaccaaggaggagcaagctgccaaattgaag
gcagagaagatccgagtcgccctggaaaaaatcaaggaggcacaggtcaaaaagctggtg
atcagggtccacatgtcagacgagagctccaagaccatgatggtggatgagcgccagacg
gtgaggcaggtgctggacagcctgctggataagtcccactgtggctacagcccggactgg
tctctagtggaaaccatcaatgagctacagatggagcgtatttttgaggaccatgagaac
ttggtggagaatctattaaactggacccgggacagccacaacaagcttatgttcatcgaa
cgcatcgagaaatatgcgcttttcaagaaccctcagaactatttgctggggcggaaggag
acatccgaaatggctgacaggaataaagaggctttattagaggagtgtttctgtggcggc
tcagtgtctgtgccagagatcgagggcatcctgtggctgaaggaggacgggaagaagtcg
tggaagaaacgctattttctcctcagagcttcagggatctactacgtccccaaaggcaaa
gccaaggcatccagagatctcgtgtgcttcctgcagttggaccatgttaacgtgtactac
ggccaggactaccgcagcaaatacaaggctcctactgactactgtctggccctgaagcat
ccacaaatccagaagaagtcacagtacattaagtatctgtgctgtgatgatgtcaggacc
ctgcaccaatgggtgaatggaattcgcatcgccaagtatggcaagcaactatacgtgaac
taccaggaagccatgaagaggaccgaggcggcctacgattggtcctctctctctacctcc
agcatccgatctggctctagctctgccagcatacatgagtcccagtctaaccactcaggc
cattcagacagtggagtggacacgggctcttctcatggccggtcccagagtgtggtgagc
tccatcttttctgaggcctggaagagaggtacccagatcgaggaaagctccaagcatatg
agaatggaggcatccagaggggccaccctgccgcatgcttcccacagtcaccggcatcac
agccagcattcagttgatcacccagccctgacgccccctccccaacctcaggtgcagccg
cagcctcagccccaccaacagcacccacatgagcatcagccccaccaacagcacccacca
cagcatcagcacccatcaatgcacccccagacaccgacccagccacaacaccagcaactg
cctccccagcatcattctcctcaacaggccccacagccacccccccagtatcctcagcgc
cctcagcagtcaccacagtctccacaacagcagccgcagaccatcagcagctacaaccac
atgcccccacagcagcaagagctggctcctccgcccccacctccccctccaccgcctccc
cctcctcccccaccccccccagttcaaatggtgtcccaccactcgccggctcccaccatg
tacaagtacagcaccatcaccaggctacagaaccagaaggcctcccagtctgccaatcac
cacaggttgcccaatcaccttcttgcattgggtcagcaagttctgcccacagcttcgacg
ctgcctgcagcaccagtgcccattaaacccaatgtaaatcacattgcggcaaggactaat
gtcccgcctccacctccccctccccctccaccatccatgccaacccctgggtccgccatg
gctgtgttgaagctgggccctcccagtccagctaccccacctgcctttattcctccgccc
ccagcacctccacctgctccacagaccaacggagttacatttcctccccctccttctccc
ccaccaccccctcctgcactggctcccatgagccagcctgttaaccccaacgggctgaag
caggcccttaaggaaaggtttcccagcccgccacgggacctcctctctccaaacggaggc
cttgaggagtccccaccgcctgcccccgccccacctcccccacctccaccccctccacct
ccgccacccccacctcctcctccccagcacttcccagtgccagcccagttcccgcctcct
cctgcaccgccgccggcgccacccaaaacattcaccccaggctttgtccctcatactgcc
cccaaacccgtgtcacctgtctccccatttcctcctgccccacctcctgcttccctgggc
ggcccgaccccaccaccacctccaccccctcctccacctgcacccctcaaaaagcagttc
agcctccagacgggccacatctccggccacccccctccgactctccccaagcagcacagc
ctgtctaaacaaacgccctactccacgggagccgctcccaccatgtctttggtgaaacaa
ctagcaagtcagtttccaggagctccgtcccaagtagccaatcacacagagagccccaaa
gcccccctctctccacctgcagtaaagaccaaaccaaaatggcagcctgggggtggccaa
cagctgcagtctccagagttccctcctccccctccagacagcaacattggcttccctgcc
cctcctcctccaccacctcccccagcccccgtcaccggcccgactccacctcctcctccg
ccacctcccccaccccccgtcaccggcccgactccacctcctcctccgccacctccccca
ccccccgtcaccggcccgactccacctcctcctccgccacctcccccagcccccgtcacc
ggcccgactccacctcctcctccactccctcctgggaacctgggctcccccttgaggagg
tcaccctctgggtcctccaatttcgtaggcaagaaaccccctcccaccccacagaggaac
accagcgtcaagttcaacgcctcaacttcctatgaggaatccaggaggaacttgttcagt
aagtttgctccccagaacaacgccgcttcttcatccccatgtcccaccgcctcctccact
ggatccccttccaaggacccttcagctggaccccctgctcccccgaaaccaggcaagctc
aacctggcaaacctgcccatggcgctccaggccaaagtgagccaagtaaagcaaaccggt
ggtggcttccctaccccaccacatgagtgtgcctacttcccacctcctcccccggcctct
gagctcttcccccctcctctacctcctggtagtgacacccatagtggaggacctcctagg
gtagccgtggtcaacccccagccccaggctccccctcctcctccgcctgtctgccttgtc
agcaactcatcatgggggaagagctccctgaaaaagactcctccacccacacttgtgcgg
cgtaataacaccaccccggagccccctccactctcaccacctccacccacctccccaaag
ggcagctcaggccagcccaatttcctggaggatctcaaccggacactgaagcgaaagtca
gtgggtcgccaaagttctctcaactcggctggcctcatggacaagttggaccctgcggga
actatggacgacatggcgctgcccccgccgccccctgagctgctcctggaccaaggaaag
caaagcaacggaggaaatggcggctacatgtccggaaacatctcaggctatgcaacacta
cgacgaggacccccacctgcaccacccaaacggggggacaccaccaaacttacttga
DBGET
integrated database retrieval system
