Sander lucioperca (pikeperch): 116045663
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Entry
116045663 CDS
T07345
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04260
Cardiac muscle contraction
sluc04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116045663
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116045663
04261 Adrenergic signaling in cardiomyocytes
116045663
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116045663
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116045663
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
Cache_3-Cache_2
DUF2201
VWA_CoxE
MCP-like_PDC_1
L544_NTransf
dCache_2
Motif
Other DBs
NCBI-GeneID:
116045663
NCBI-ProteinID:
XP_031149301
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Position
7:14579830..14647699
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AA seq
1101 aa
AA seq
DB search
MNTCRVHAWVFLVLLWQNGTLASQFPTQLMIKEWVDQIQKELVTLADTATAGKSLTQIFL
KNQHLYSVEQNDAEELVARAATKIEQLLRKRSAALEKLATAAENFQMQHNWKDEFEGDEI
SYYNAKDNLDANETEGRKNRIRPDFIEDPSFKRLTDHNHTAVHIPTDIYDGSTIVLNELN
WSEALEDVFRKNREDDPTLLWQVYGSATGLARYYPASPWMDARKTPSKIDLYDVRRRPWY
IQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVVYFNTRVKKTACF
DHLVQANVRNKKLLKDAVQNITAKGITNYTKGFEFAFEQLSTTNVSRANCNKIIMLFTDG
GEERAQAILEKYNADKKVRIFTFSVGQHNYDKGPIQWMACSNKGYFYEIPSIGAIRINTQ
EYLDVLGRPMVLADKQAKQVQWTNVYLDALQLGLVITGTLPVFNKTKTKDDRNGEHQNQL
ILGVMGIDVSLDDIKKLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKERIRNRKLRLNNK
YAVTFHEEPVTLDFLDAELENDIKVEIRRMMIDGETGERTINTLVKTQDERYIDRGVRTY
TFAPVNGTDYSLALALPPYSEHFIQAKLGDNMKKAMSSSWGQEAMETIQQEKFDEFGYTY
IAPRAYCKELKLSLNNTQFLLDFSQYIDRNTPEACNVSLVNRLILDAGLTAELVKLWNEQ
TVDGIVARFVATDGGITRVYPRSAGEEWTENPETYESSFYKRTLDNEIYIFTAPSFNPES
RDPVSDSGILVSKAVDITIDEVTLKPAVVGVKLNISFWMNSFMNATMKLNCKDEICGCLR
NDKHVDCVILDDGGFLLMSNQDEYISLIGQFFGEVDPVLMINLVNTSLYSFNKTYDYQSV
CDPEKDSKAAAGPRSVYVPTIADLLSIGWWASSAAWSILQQLFFGLMFPNLLEAAESADD
DIPDAMFKESCITEQTQYFFDNDERSYSGVLDCGNCSRMYRAEKLPNTNLVFLITDAKAT
CLSCDPRPLRQAEQPSEGPDPCELAQNPRYRKGPDVCFDNNENDEPLCPISRGSTLSPTP
LLLFLALSSGRMILTVEVGPA
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaatacctgcagggtacatgcctgggtgtttctggtcttattatggcagaacgggact
ttggcatcgcagtttcccacacagctcatgattaaagaatgggttgatcagatacagaaa
gagcttgtcaccctggcagacacagccacagctgggaagagcctcactcagatttttctg
aaaaaccagcacctgtacagtgttgagcaaaacgacgcagaggagctggtggccagagca
gccacgaaaattgaacagctgctgcggaagagatctgctgccttggagaaactggccaca
gctgctgagaatttccagatgcagcataactggaaagacgagtttgagggtgatgaaatc
tcctactacaatgcaaaggacaatctggatgcaaatgagacagagggaagaaaaaacagg
attcgaccagactttatagaggatccatcatttaaacgtttgactgatcacaaccacacg
gctgtccacatccccactgacatctatgatggctccaccattgtgctgaatgaactgaac
tggtcggaggcactggaggacgtgtttagaaagaacagagaggatgacccgacccttctc
tggcaggtgtatggtagcgctacgggcctggctcgctactatccagcttctccctggatg
gatgctcgcaagaccccaagtaaaattgacctgtatgatgtccgcaggaggccatggtac
attcaaggagctgcctcacccaaagatatgctaatccttgtggatgcaagcgggagtgtg
tctggcttgactctcaaactgatcaggacctccgttagtgagatgctggagactctgtct
gatgacgactatgtcaacgtagtttattttaacaccagggtgaagaagacggcgtgtttc
gaccatctggttcaagccaatgtgaggaacaagaagctgctgaaggatgctgttcagaac
atcacagctaaaggaattacaaactacacaaagggctttgagtttgcttttgagcagctc
tcaacaaccaatgtgagtagagcaaactgcaacaagatcatcatgctgtttactgacgga
ggagaggaaagagctcaggccatactggagaagtacaatgctgacaaaaaggtgaggatc
ttcaccttctcagtaggacagcacaactatgataaaggacccattcagtggatggcctgt
tccaacaaaggttacttctatgagattccttccatcggagccatcagaataaacacacag
gagtacctggatgtcctaggcagaccaatggttttggcagacaagcaggccaaacaagtc
cagtggactaatgtttaccttgatgctttgcaactgggtctggtcatcactgggacacta
cctgtcttcaataaaacgaagaccaaagatgacaggaatggcgagcaccagaatcagttg
attcttggcgtgatggggattgacgtgtctctggatgacatcaagaagctcacaccacgc
ttcacaattggtccaaatggatactactttgccattgatcccaatggatacgtcctgctg
caccccaatctccagccaaaggaaagaattcgtaacaggaagctcaggctaaataataag
tatgctgtcacttttcatgaggaacctgttaccctagacttcctggatgctgagctggag
aatgacatcaaagtggagatcagaagaatgatgatcgatggtgagacaggcgaacgcacc
attaacactctggttaaaactcaggatgagaggtacatcgatagaggagtcaggacctac
acgtttgccccggtcaatggaacagattacagcctggctcttgctctgcctccatacagt
gaacacttcattcaagctaaactgggggacaacatgaaaaaagctatgtcttcttcttgg
gggcaagaagccatggaaaccatacagcaggaaaagtttgatgagtttggttacacctac
atcgctccaagggcatactgcaaagagctgaagttgtcactcaacaacacccagtttctc
ctcgacttcagccagtacattgataggaacactccagaagcatgtaatgtttccctggtg
aatcgactaatcctggatgcaggtctgacagctgaactggttaaactttggaacgagcag
acagtggatgggatagtggccaggtttgtagccacagatggaggaatcacaagagtctat
ccaagaagtgctggggaagagtggactgagaatcctgagacatatgagtccagcttctac
aaaaggaccctggacaatgaaatttatattttcacagctccgtctttcaacccagaaagc
agggaccctgtttctgactcaggtattctagtgagcaaagcagtggacatcacgattgac
gaagtcacgctcaaaccagctgtggtgggagtgaaactcaatatttcattctggatgaac
agtttcatgaatgctacaatgaaactgaattgcaaggatgagatctgtggctgtctgagg
aatgacaagcatgtagactgtgtgatcctggatgatgggggatttcttctcatgtccaac
caggatgagtatatctctctgataggtcagttctttggcgaggtggaccctgtgctgatg
atcaacctggtcaacacctccctgtactccttcaacaagacctatgactaccagtctgtc
tgcgacccagagaaagacagcaaggccgcagcaggaccccgctccgtctatgtgcctacc
attgcagacctgctcagtattggctggtgggcctccagtgctgcctggtcgatactccag
cagctcttctttggtctcatgttccccaaccttctagaggcagcggagtcagcagatgat
gacataccagatgccatgtttaaggaaagctgcatcacagagcagactcagtacttcttt
gacaatgatgaaagatcctactcaggtgtcctggactgtggaaactgttccaggatgtat
cgtgccgagaagctgccaaacaccaacctagtgttcctgatcactgatgccaaggcaacg
tgtttgtcgtgtgacccaaggccgcttcgacaggctgaacaaccctctgaaggtccagat
ccatgcgaactggctcagaatcccagataccgcaaagggccggacgtgtgtttcgacaac
aatgaaaacgatgagcccttgtgtccaatcagcagaggttctacattgagccccacacct
ctcttattgtttctggcgctgagttcagggaggatgattctgactgtggaggtgggacct
gcctaa
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