Sander lucioperca (pikeperch): 116046074
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Entry
116046074 CDS
T07345
Symbol
pbx1a
Name
(RefSeq) pre-B-cell leukemia homeobox 1a isoform X1
KO
K09355
pre-B-cell leukemia transcription factor 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116046074 (pbx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116046074 (pbx1a)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116046074 (pbx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBC
Homeobox_KN
Homeodomain
DUF7260
UCH
Peptidase_C97
GAIN
Motif
Other DBs
NCBI-GeneID:
116046074
NCBI-ProteinID:
XP_031150102
Ensembl:
ENSSLUG00000018545
LinkDB
All DBs
Position
9:complement(11872418..11920778)
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AA seq
447 aa
AA seq
DB search
MDEQPRLMHSHGVGMAGHPGLAQHMQDGTAGTDGEGRKQDIGDILQQIMTITDQSLDEAQ
ARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEEEPPDPQLMRLDNMLLAEGVAGPEK
GGGSAAAAAAAAATGGIGADNSAEHSDYRAKLSQIRQIYHTELEKYEQLDIVPTGGGYGQ
RQNFKKNACNEFTTHVMNLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQSTCEAV
MILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNW
FGNKRIRYKKNIGKFQEEANMYAARTAVSATSVSAHGSQANSPSTPNSAGSAGSFNMSNS
GDLFMSVQSLNGDSYQGGQVGANIQSQVDTLRHVISQTGGYSDSLAASQMYSPQGINTNG
GWQDAPTPSSVTSPTEGPGSVHSDTSN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagcctcggttgatgcactcccacggggtaggcatggccggacaccctggc
ctggcgcagcatatgcaggatggcacggcggggacggacggagagggaagaaagcaggac
atcggagacatattacagcaaataatgaccatcacagaccaaagcttagacgaagcacag
gcgaggaaacatgcactgaactgccacagaatgaaacctgctctcttcaacgtcttgtgt
gaaataaaggagaaaacagtgctcagtatccgtggcgcccaggaggaagagcccccagat
cctcagctgatgcgactggacaacatgctgctggcggagggcgtggccgggccggaaaaa
ggtggcgggtcggcagctgctgcagccgctgcagccgccactggcggcatcggtgccgac
aactcagcagaacactccgactaccgtgccaagctgtctcagatccgacaaatttaccac
acagagctggagaaatatgaacagttggacatcgtcccgactggtggtggatatggacag
aggcaaaactttaaaaaaaatgcgtgcaatgagttcaccacccatgtgatgaacctgctg
agggagcagtctcgcacacgacccatctcgcccaaagagatcgagcgcatggtcagcatc
atccaccgcaagttcagctccatccagatgcagctgaaacagagcacctgcgaggccgtc
atgatcctgcgctcacgcttccttgatgccagacgaaagaggaggaacttcaacaaacag
gcgacagagatcctaaacgagtacttttactcccacctcagtaacccctatcccagcgag
gaggccaaagaagagctggccaagaaatgcagcatcacagtctcacaggtatcaaactgg
tttgggaacaagagaatccgatacaagaaaaacattggcaagttccaagaagaggccaac
atgtacgcagcacggactgcagtcagtgcaaccagtgtgtctgctcacggcagccaggca
aactccccatcaactcccaattcagcaggttctgctggctcttttaacatgtcaaactcc
ggagacttgttcatgagtgtgcagtccctcaatggggactcgtaccaaggggggcaggtt
ggggccaacatacaatcccaggtggatacccttcgccatgttatcagccagaccggagga
tacagtgacagcctcgcagccagccagatgtacagtccacagggcatcaacacaaatggt
ggctggcaagatgctccgactccttcgtcagtgacatcgcccacagaaggacccggaagc
gttcattcggatacttccaactga
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