Sander lucioperca (pikeperch): 116046202
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Entry
116046202 CDS
T07345
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1-like isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116046202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116046202
Membrane trafficking [BR:
sluc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
116046202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
GOLD_2
KASH_CCD
A_thal_3526
Motif
Other DBs
NCBI-GeneID:
116046202
NCBI-ProteinID:
XP_031150312
Ensembl:
ENSSLUG00000002684
LinkDB
All DBs
Position
9:7926053..7947661
Genome browser
AA seq
1484 aa
AA seq
DB search
MASSSSVGDNQLQRIIRDLHDAVSELSKEHNECGEPVTDDSSYLHKFFYKLEYLLQFDQK
EKTTFLGQRKDYWDYFCDCLIKIKGANDGIRFVKSIPELKTSLGKGRAFIRYSLVHQRLA
DTLQQCLINQKVTSDWYYARSPFLKSHLTADIINHLYELNQIQFDVAARGYDLDADWPKF
ARRTLGTASPASLWRPPSRCSSINSLISSYSHSQAQEFLPIPDLSQSLLGELGELGEPSP
CSIAENLRIELDQSELRQQELLIQVQEFGKEATELKGVVKDLQGQLLAVQKSSSHSVSTA
TQSNQETENQERAHHLQTCREAINSELHDRLTAAENRNMELLSKLDEALKEKGQQTASYC
NSAWKIQELLDKQKNTEEERLEVKREAEDRTRHSERLSQELKLREEELRNSEEKLAEVTA
RAHDEREEALKRLEELQSAVRRIQGVLSLKEKETGNLRAQLQDLQSSLECRERQAEDLRK
RLHEEREEVEQRWSMSSSQNEELETQLLDQRRALKNREKELAVSSERIKHLEEQLEKLNV
EKENLSSRLADNEVVFSENIEDYKSKCSNLIEINAKLLQSVTKSEGSITELTESRAALLE
QLASLRASEKHLKGRVEAAKVCVEDREKKLLDENLHLEETAQKALIQKEVSNAQLKKLEH
ENRELFEVQSSLKKQLATTQQELDLFTAKAAKLDQNLIVSQRSQAELLEKLQETEAKLKE
QTVECGRLQVRAEKLESRTWELHDEKGAAESNEKVQKLHDEHQTSSMETKEAPFRLVIAE
AQLELNLREVQRLQEEVVELRAQLLAGTEERMKVQALQEVTESSKEDLRVLAEQLKAQVE
ELNRRHVDEILRSREREEALMRERDGEAQARAGLAAEVTASREELNKLKLGYEALCLDNS
ESREALHRANTETAELGVHVCMLTAENEEARLRWEGLSTRLQELDEEAAQEAERLNTCME
QLSRENHRLLGQLHNDEGLLATKQELQGKLFKVQQEAEAVQETCQEEIQALRFQLSSQAL
SYDSQLQTVNQELQEVKLHLTTEQEKVVDLENKFKKLEAENQRYCQQIEEKNIQMADSEN
LIQQKEDEIIHLKGNLSRSKDALAMAQQTCQEMSENLRRVTQDKQSFDLRTAAELDDLYR
TKINLEERLVELIREKDALWQKTDALEFEQKLRDEETERDVNYCLGCHSQFSWWLRKYNC
RLCGRPFCYYCCSNTVSTQQGGPRERCCRDCYNQHSAVVERHPQEEVTNSTPGTPFSRLL
QAGRAMTTVLGAVEGDKLDDGVFDIISEEEVSGVYDSDSLSFATACSPGHGQQGAAQLNS
SASAGDLTSEDTEDLSAAVQDAEICLLKSGDLTLSVHFTVNDMSGFGDSSRELFIKSSCY
STIPITMSAPGPTVSWTFTSEPKSIYFSVVYRESTETPLEQAKVLIPLTRCNSHKETIQG
ELKVRNAGEYTLIFDNSFSRFISKKVLYHLSLDKPVVYDGTDLL
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctcatcagttggagataatcaactgcagaggataatccgagatctgcat
gatgctgtgtcagagctgagtaaagaacacaacgagtgtggtgaacccgtaactgatgac
agctcctacctgcacaagttcttctataaactagaatacctgctgcagtttgaccagaaa
gagaagacaacctttcttggtcagaggaaggactactgggattacttctgcgactgcctg
attaagatcaagggagctaacgatggcatccgttttgttaagtccatccctgagttgaag
acatcactggggaaaggaagggccttcatccgctactcactcgttcaccagcgtcttgct
gacacactgcagcagtgtcttataaaccagaaggtcacaagtgactggtattatgcccgg
agtcccttcctcaagtctcacctcactgctgacataatcaaccatctttatgagctcaac
cagatccaatttgatgtggcagccagaggttacgaccttgatgcagattggccaaaattt
gcaaggagaacattaggcactgcctcaccagcatctctgtggaggcctcccagtcgctgc
tccagcatcaacagcctcattagcagctactcacactcacaggcgcaggagtttcttcca
atcccagacttgagtcaaagtctccttggtgaactaggggaactgggggaaccctctcct
tgcagcatcgcagagaacctccgcattgagctcgaccagtcggagctcagacagcaagag
cttctgatccaggttcaggagttcgggaaagaagctactgagctcaaaggtgtggttaaa
gaccttcaaggccagctgttagcagttcagaagtcctctagccactctgtatctactgca
acccaaagtaaccaagaaacagaaaatcaggagagagcacatcaccttcaaacctgtagg
gaagcaataaacagtgaacttcacgacagactcacagctgctgagaacagaaatatggag
cttctttctaagttggatgaggctctcaaagaaaagggtcaacaaaccgctagctattgc
aactcggcctggaaaatccaggagctcctggataaacaaaaaaacactgaggaggaaagg
ttggaggtgaaaagagaggctgaggacaggaccaggcactctgagcgtttgtcccaggaa
ctaaaactcagggaagaagagttgaggaacagtgaagaaaagctggctgaagtaacagcc
cgagctcatgacgaacgtgaggaggcactcaaacggttggaggagctccaaagtgcagtc
aggcgaattcagggggtgctgagtttgaaagagaaggagacggggaacttgagagcccag
cttcaggatttacagtcatcactggagtgcagagaacggcaggcggaggacctgaggaaa
agactgcatgaggagagggaggaagtagagcagagatggagcatgagtagtagccagaat
gaggaacttgagacccagctcttggatcaaagaagagctctaaaaaacagagagaaagag
cttgcagttagttcagagagaatcaagcatttagaggagcagttggagaagctaaatgtt
gagaaagaaaatctgagctcgagacttgctgacaatgaagttgttttctctgagaacatt
gaggactacaaaagcaaatgcagcaatcttatagaaataaacgctaagctactccaatca
gttacgaaaagtgaagggagcattacagagctgactgagagcagggcagccttgttagag
cagctagcttctttgagggcttctgaaaaacacttaaagggccgagttgaggctgcaaag
gtgtgtgtggaagatcgagagaagaagctcctagatgaaaacctgcatttggaggagacg
gcccagaaggcgcttatccagaaggaagtatctaatgctcaattaaagaagctcgagcat
gagaacagggagctttttgaagtccagtcctcgttaaagaaacagttagccacaactcaa
caagaactggacttattcactgccaaagctgcaaagttggaccagaacctcattgtgtcc
caaagaagccaagcagagttacttgaaaaactccaagaaactgaggctaaactgaaagaa
cagactgttgaatgtgggcgtctgcaagttagagcagagaagctggagagcaggacatgg
gagctgcacgatgaaaaaggagctgcagagagcaatgaaaaagtgcagaagcttcatgat
gagcatcagacatcctcgatggaaaccaaagaggccccgttcaggctagttatcgctgag
gctcaactggagctcaatctaagggaggtgcagcggctccaggaagaggtggtggagctc
agggctcagcttctagcaggaactgaggagaggatgaaggttcaggcactgcaggaggtg
acagagtcttctaaagaggacctccgtgtcttagcagaacaactgaaagcccaggtagag
gagctaaaccgccggcatgtggatgagattcttcgatcccgggagcgagaggaggctctt
atgcgggagcgtgatggagaggctcaggctcgggcaggtctggctgcggaggtgactgcc
tccagagaggagctcaataaactgaagctgggttatgaagccttgtgtctggacaacagc
gaatccagggaggctctccatagagccaacacagaaacagctgaactcggtgtgcatgtg
tgtatgctaactgctgagaatgaagaggctcgtctgcgctgggagggcttgtcaacaagg
ctgcaagagctggacgaggaggcagctcaggaggcagagaggctgaatacctgcatggag
cagctgagtcgggagaatcatcggctcctcggtcagctccataatgacgagggtttgttg
gccaccaagcaggagctgcagggtaagctgttcaaggtccaacaggaggctgaagccgtg
caggagacgtgccaggaggagatccaggcactccgcttccagcttagcagccaagccctg
agctacgacagccagctccagactgtgaatcaagagttacaggaagtgaaattacacctg
acgactgagcaggagaaagtggtcgacctggagaacaaattcaaaaagctagaggctgag
aatcagagatattgccaacagattgaggagaaaaacatccagatggccgattctgaaaat
ctcatccagcagaaagaagatgagataatccatctgaaagggaatctatcaaggtctaaa
gatgctctagcaatggctcagcagacctgtcaggagatgagtgaaaatctacggagagtc
acacaggacaaacaaagctttgatcttaggacagctgctgaactcgatgatctttaccgt
accaaaatcaatttggaagaaaggcttgtagaactcatcagggagaaagatgcactgtgg
cagaagacagatgccctggagtttgagcagaaactgcgggatgaggagacggagagggac
gtaaactactgtctgggctgtcatagtcagttcagctggtggctccgcaagtacaactgc
agactgtgtgggcgtcccttctgctactactgctgcagtaacacagtgagcacccagcag
ggtggccccagagagcgctgctgcagggactgttacaaccagcacagtgcagtagttgag
cgccacccacaggaggaagtgactaacagcacaccggggacacctttcagtcgtttgctg
caggctggaagagcaatgacgactgttttaggagcagttgaaggtgacaagttggatgat
ggtgtttttgacatcatttcagaggaggaagtgagtggggtctatgacagtgactccctc
tcttttgccaccgcctgctctcctggacacggacagcagggggcagcacaactaaacagc
agtgccagtgcaggagacctaacatcagaagatactgaggacctcagtgctgcagtacag
gatgcagagatctgcctgctaaagtctggagacctcacactctccgtccacttcacagtg
aatgacatgtcagggtttggggacagctcccgagagctcttcatcaagtccagctgttac
agcaccatccccatcaccatgagtgctcctggtcctactgtctcttggacgttcacctct
gaacccaagagcatctacttcagtgtggtctacagggagagtacagagactccactagag
caggccaaggtcttgatcccactgactcgctgtaactctcacaaagagacaatccagggg
gaactgaaagtcagaaacgctggagaatacacactgatctttgacaactctttctccagg
ttcatctcaaagaaagtgttatatcatctgagtctagacaagcctgtggtctacgatgga
actgacctcctctga
DBGET
integrated database retrieval system
