Sander lucioperca (pikeperch): 116046808
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Entry
116046808 CDS
T07345
Symbol
tdg.2
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116046808 (tdg.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116046808 (tdg.2)
Enzymes [BR:
sluc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
116046808 (tdg.2)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116046808 (tdg.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
TFIIA
AT_hook
CDC45
Ndc1_Nup
DDHD
Motif
Other DBs
NCBI-GeneID:
116046808
NCBI-ProteinID:
XP_031151074
Ensembl:
ENSSLUG00000015694
LinkDB
All DBs
Position
7:18969992..18976907
Genome browser
AA seq
443 aa
AA seq
DB search
MLIYSNKSTVKMEENQYTSLTVPTDYFQQWYQSSQQHPEAQYVMPYHNTGHYTEGPRDEL
VMAELSVHREPPVYQEPFYQNYNPPAQNHYQELTYQPNVREQQQQQQQQQQQQQQQQQQQ
QQQHHPAHLHHPQHQHTIQQQEPSVQHQPQPAGPPQVVTPVKKKRGRPPKQQAEEGKTQE
EENEIEAAKKAKRALNRFNGMSVAEVMAKTLPDVISYNLDILIIGINPGLLSAFKGRHYP
NPGNHFWKCLFLSGLTDEQLNYMHDQSLPEKYSIGFTNMVERTTPGSKDLSSKEIREGGR
QLLDKLQKYKPLIAAFNGKGIYEIFCKETFGVKAKNLDFGLQPYKIPETETVCYLMPSSS
PRCAQFPRAQDKVHFYIKLKELRDQMKGLAPRPEVEETQYLFDLQLAKEDAKRMAIKEEQ
VDPEYESCSGLHGDAKQSSNSSN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgttaatttattcaaataagtcaacagttaagatggaagaaaaccagtatacatcattg
acggttcctacggattattttcagcagtggtaccagtccagccagcagcaccccgaggcg
cagtatgtgatgccatatcacaacacgggccattacacagaaggtcccagagatgagctt
gtcatggccgagctgtctgtccaccgcgaaccacctgtttaccaagaacctttttaccag
aactataaccccccggcccaaaatcactaccaggagctgacctaccagccaaacgtcagg
gagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcag
cagcagcagcatcatcctgcacacctgcaccaccctcagcaccaacatacaatacagcag
caggagccgagtgttcagcaccaacctcagcctgctggtccacctcaagttgtgacaccg
gtgaagaagaagagaggtcggcctcctaagcagcaggcggaggagggcaagacacaggag
gaggagaatgagattgaggcggcaaaaaaagccaagagggctctcaaccgcttcaacggc
atgtcagtggctgaggttatggccaaaaccctgccagacgttatatcctacaatcttgac
attttgataattggaattaacccaggactattgtcagccttcaaaggacgccattatcca
aacccaggaaaccatttctggaaatgtctgtttctttctggtctaactgacgagcagctc
aactacatgcatgaccaaagcctgccagagaaatatagcatcggctttaccaacatggta
gagaggaccacacctggtagcaaggacctctctagtaaggagattcgtgaaggaggtcga
cagttacttgacaagctgcagaaatacaaaccattaatagcagcttttaatggaaaaggt
atttatgaaatcttctgcaaagaaacctttggtgtgaaggcaaagaatctcgactttggt
ctacagccttacaaaatcccagaaactgaaacggtgtgctacttgatgccgtcatcaagc
ccccgctgtgcccagtttccacgtgcacaggataaggttcatttctacatcaagctgaag
gaactgcgagaccagatgaaaggcctggcaccaaggcccgaggtggaagagacacagtac
ttgttcgatctgcagctagctaaagaggatgctaagaggatggcaatcaaagaagagcag
gtggatccagagtatgaaagctgtagtgggctgcatggggatgcaaagcaaagcagcaac
tcctccaactaa
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integrated database retrieval system
