Sander lucioperca (pikeperch): 116051141
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Entry
116051141 CDS
T07345
Name
(RefSeq) HLA class II histocompatibility antigen, DQ beta 1 chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04145
Phagosome
sluc04514
Cell adhesion molecules
sluc04672
Intestinal immune network for IgA production
sluc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116051141
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116051141
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116051141
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116051141
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116051141
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116051141
Exosomal proteins of epithelial cells
116051141
Exosomal proteins of breast milk
116051141
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_2
Ig_3
C2-set_3
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
116051141
NCBI-ProteinID:
XP_031157252
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All DBs
Position
6:complement(36619065..36626852)
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AA seq
252 aa
AA seq
DB search
MTCFTCLIFLCLFSQSVDCDADGNGYFMYADFWCAVYSRDREQVEYLVDWYFNEEFMMQY
NSTVGSWVGFTPAGLVSASMLNEDKHDLLQRRVEKQMICVNNVDLIFNTTEENMAEPSVT
LVETTSSSHDTMLVCSAYDFYPKYIRVTWYRNGQEVTSGVTFSEVMTNGDWTYQVHYYLE
YTPGQQDNVSCMVEHVSLRKPKVYDWDSSMHRTERSYLIGGASALLLGAVLLSAGLVHYR
RKSSDPRFSNAL
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgacatgcttcacgtgcctgatctttctgtgtcttttctctcagtctgtggattgtgat
gctgatggaaatggatacttcatgtacgccgacttctggtgtgccgtgtactccagagac
cgggagcaggtggaatatctggtcgactggtattttaacgaagagtttatgatgcagtac
aacagcacggtcggcagctgggtgggcttcactccagctggattagtatctgcgtctatg
ttaaatgaagacaagcatgatcttctgcagaggagagtggagaagcaaatgatatgtgtc
aacaatgtcgatttgatatttaacacaactgaggagaacatggctgaacccagcgtcact
cttgtggagaccaccagctccagccacgacaccatgctggtgtgcagcgcatacgacttc
taccccaaatacatcagggtgacgtggtaccggaacggacaggaagtgacctcgggcgtg
acctttagcgaggtgatgacaaacggagactggacctatcaggtccactattacctggag
tacacacctggccagcaggacaatgtcagctgtatggtggagcatgtcagcctcaggaaa
cccaaggtgtatgactgggattcctccatgcatcggactgagagaagctacctgattggt
ggagcgtctgccctgctgttgggagcagtgttactgtccgcgggactggtccactacagg
aggaaaagctctgatccacgattttcaaacgctctatga
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