Sander lucioperca (pikeperch): 116053293
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Entry
116053293 CDS
T07345
Symbol
cxcl12a
Name
(RefSeq) chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1)
KO
K10031
C-X-C motif chemokine 12
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04060
Cytokine-cytokine receptor interaction
sluc04672
Intestinal immune network for IgA production
sluc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116053293 (cxcl12a)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
116053293 (cxcl12a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116053293 (cxcl12a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sluc04052
]
116053293 (cxcl12a)
00536 Glycosaminoglycan binding proteins [BR:
sluc00536
]
116053293 (cxcl12a)
Cytokines and neuropeptides [BR:
sluc04052
]
Cytokines
Chemokines
116053293 (cxcl12a)
Glycosaminoglycan binding proteins [BR:
sluc00536
]
Heparan sulfate / Heparin
Chemokines
116053293 (cxcl12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
Motif
Other DBs
NCBI-GeneID:
116053293
NCBI-ProteinID:
XP_031160200
Ensembl:
ENSSLUG00000021218
UniProt:
A0A8D0A3P0
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All DBs
Position
15:18696410..18705114
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AA seq
98 aa
AA seq
DB search
MDMKLLAVVAALTVVIYAPPTQAKPISLVERCYCRSTVNNLPRGYIRELRFIHTPNCPFQ
VIAKLKTNKEVCVNPEIRWLQQYLKNAINKMKKSKQDN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atggatatgaagctgttggcagtcgtagctgcgctcacggtggtgatatatgcgcctcca
acacaagcaaagcccatcagtctggtggagagatgctactgtcgttcaacagtcaacaac
ctcccacgaggctacattcgagagctcaggttcatccacacgcccaactgccccttccaa
gtgattgccaagctgaagacaaacaaagaagtgtgtgtgaacccagagatccggtggctg
cagcagtacctgaagaacgccatcaacaagatgaagaaatccaagcaggataactaa
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