Sander lucioperca (pikeperch): 116054117
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Entry
116054117 CDS
T07345
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00310
Lysine degradation
sluc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116054117 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116054117 (prdm6)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116054117 (prdm6)
Enzymes [BR:
sluc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
116054117 (prdm6)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116054117 (prdm6)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116054117 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
zf-C2H2_11
Zf-C2H2_ZNF451_C
zf-C2H2_15
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
116054117
NCBI-ProteinID:
XP_031161320
Ensembl:
ENSSLUG00000012529
LinkDB
All DBs
Position
2:37417140..37524417
Genome browser
AA seq
635 aa
AA seq
DB search
MLKPGDASGSAFLKVDPSYLQHWQQLFPQSQLKAPLAPPPPLPDRLSIPMDNLRPSRLHS
HLLASTHCTSSSSSTSSSASSSSAAAAAAAAALTPSSSISISTSTGISQLPVPQQIALFG
QALAPVCAGPGGPGGGGGGDLMVVVPPENQHGHNPAAGLLHQAKEQSCGGVGVVSSSVKS
SGGGGEEGGKGASGRFKLTSEELDYYLYGQQRMEIIPLSNHTGEVNNRCDMCADNRNGEC
PMHGPLHSLRRLVGTSSTAAPVTLPDVPDWLRDLPREVCLCTSTVPGLGYGICASQRIPQ
GTWIGPFQGVHLLLDKLHSGAVRNSRHLWEIYDAEGTLQHFIDGNDPSKSSWMRYIRCAR
HCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPTT
VMEAMTRQESLQSFSKNGKPSSSSSSTPSTTLMRSMVFPHSPCPRNFSLLDKVGVGIQSD
SSFSQLGSKNQRVLASPTSTSQLSSDFSDWHLWKCGQCFKTFTQRILLQMHVCPQNPDRP
YQCGHCSQSFSQPSDLRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCE
RCDRSFTQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaccgggcgacgcaagcggctcggccttcttgaaggtggacccgtcctacctg
cagcactggcagcagctcttcccccagtcgcagctgaaggctcctctggccccaccaccg
cctctgcctgaccgcctctccatccccatggacaacctgcgcccatcccgcctgcacagc
cacctcctggcctccacacactgcacctcctcgtcttcatctacatcttcctccgcttct
tcttcttccgcagcagcagcagcagcagcagcagctctaaccccatcctcctccatctcc
atctccacctcgacagggatctcccagctgcccgtcccccagcagatcgcactctttggg
caggcgttggccccggtgtgtgccgggccaggaggaccagggggaggaggaggaggagat
ctgatggtggtcgtgcccccggagaaccagcatggtcacaacccagcagcggggcttctc
catcaggccaaagagcagagctgtgggggggtcggcgtggtgtcatccagcgtgaagagc
agcggaggaggaggagaggagggcggcaaaggagcgtcgggcaggttcaagctgacgtcg
gaggagctggactactacctgtacggacagcagaggatggagatcatcccactgagcaac
cacacgggagaggtcaacaaccgttgtgacatgtgtgcagataacaggaacggcgagtgt
ccgatgcacggccctcttcactctctgcgtcgactcgtcggcaccagcagcacggcggct
cctgtcaccctgccggacgtccctgattggctcagagatctgcccagagaggtgtgtctg
tgcaccagtactgttcctggtctgggatacgggatctgtgcgtctcagaggatccctcag
ggaacctggatcggcccgtttcagggagtccatctgctgctggacaaactgcattctgga
gcggtcagaaacagcagacacctttgggagatctacgatgcagaggggacgttacagcac
tttattgatggtaatgatcccagtaaatccagttggatgaggtatatccgctgtgccaga
cactgtggggagcagaacatgatggttgtacaatacaggtcctgtatcttctacagagcg
tgtatggatatccccagaggaacagagctgctggtttggtacaatgactcctacacttcc
ttcttcggcatcccgctgcagtgcatcgctcaggacgaaaacttaaacgtcccaaccacg
gtgatggaggcaatgactaggcaggaatcactccaatccttcagcaaaaacggcaaaccc
tcgtcttcctcctcttccactccctccaccaccctcatgcgctccatggtcttcccccat
tctccctgccctagaaatttctccctgttggacaaggttggggttgggattcagtccgac
tccagtttcagccagttgggttcaaagaaccagcgagtcctggcgagcccgacctccacc
agccagctaagcagtgacttcagcgactggcacctgtggaagtgtggccagtgcttcaaa
accttcacccagaggatcctgctgcagatgcacgtctgtccacagaatccagacagacca
taccagtgtggccactgctcccagtccttctcccagccatcagatttgaggaaccacgtg
gtgacgcactcgagcgaccgacctttcaaatgtggctactgcggccgtgcgttcgctggt
gccacaacgctcaacaaccacatccgcacgcacaccggggagaagccgttcaagtgtgag
cgttgtgaccgcagcttcacacaagccactcagctcagccgccaccagcgacttcccaac
gagtgtaaacccgtgaatgagagcagcgagtccattgaggtggattaa
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