Sander lucioperca (pikeperch): 116058539
Help
Entry
116058539 CDS
T07345
Name
(RefSeq) plakophilin-1 isoform X1
KO
K10387
plakophilin 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116058539
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
116058539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
HEAT_2
Cnd1
ARMC9_ARM
Nipped-B_C
Motif
Other DBs
NCBI-GeneID:
116058539
NCBI-ProteinID:
XP_031167238
Ensembl:
ENSSLUG00000012132
LinkDB
All DBs
Position
12:36451332..36469101
Genome browser
AA seq
717 aa
AA seq
DB search
MMAPEPLRSAMTSKSREDTSLALPSDNKLHSGQQRVLHQVHTIERSKSKQGKNGLISPSP
TSLSPKTLTTYEFGTFKFSPSKANGTFSRTNSTLSTGYNKSVNTQKSRTLSAKTTRGRQV
SSGIWEQQINTSSWPQGTNGLRAARSDPALAHPFSATTMRGKGMLAQGQQSLQSRINRNS
TYSMTNGTQMTNSQTRIVRPPSAQYRIEGKMGTIKTSNIEQQSAVNSAINMSDMTLKEAV
EFLSHPEENYQQCGATFIHHTTFKEEGAKQEVFQLGGIPALVTLLRSPNPEVSQAAAGAL
RNLVFKDQDIKLEVQHCGGIAKALQLLKETNSTETQKQITGLLWNLSSADKLKAELIATA
LPALTENVVVPFTCWSDNSANNNIHPDVFNSATGCLRNLSCGQQKERQAMRECRGLIDSL
MGYVQSCVAEESPDDKSVENCACILHNLTYQLEDESPECFSSFQPEREDQHGKRKSPTIG
CFSPKSSKAQKEFSFDAVRGKPEDSKPSGVKWLCHPIAMQTYLSLLGSSQNGATLEACCG
ALQNLTAGKGLGSSAMCQILVQKQGALLHMPHLLKSPNQSLQKTAISLLGNMSRTSSLQT
PMAKQILPELTSLVSSGPREMGNSDETIATACSTLRSLMLADTEVSKKFVKSELVSSVAD
LSENRSFPKGSKAASLLLYSLWNDKNLQGVAKKLGMAKSLFVNDNTTAMHRSVQVIE
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatggctccggagccgctgcgttcagcaatgactagtaagagcagggaggacacgtcg
ctcgcgttgccctccgacaacaagctgcactcgggacagcagcgcgtgctgcatcaagtg
cacactatcgagaggagcaagtccaaacaggggaagaacggcttaatatcaccttcacca
acaagcctgtctcccaagactttgacaacatatgagtttggaacgttcaagttttctcca
tccaaagcaaatggcaccttcagtcgtaccaactccactctgtcaacgggctacaacaaa
tcggtaaatactcagaagagtcgtaccctatccgctaaaaccacgagaggaagacaagtc
agctcaggcatatgggaacagcaaatcaacacttccagctggccccagggtaccaatggg
ctgagagctgctcgcagtgacccggccttggctcatccattttctgcaaccactatgcga
ggcaaagggatgttggctcagggccagcaaagccttcagagtcggataaatagaaacagt
acctattctatgaccaacggcacacagatgaccaacagccagacacgcatcgtccggccg
ccctctgcccagtatcgcattgagggcaaaatgggcaccatcaaaacatccaacatagag
cagcaatcagcggtgaacagtgcaataaacatgtcagacatgaccctaaaggaggccgta
gagttcctgtctcaccctgaagagaattaccagcagtgtggagccaccttcatccaccac
accaccttcaaagaggagggcgccaaacaggaggttttccaactaggaggtatccctgct
ctggtgaccctgctgcggagccccaatcctgaggtgagccaggctgctgctggggctctg
aggaacctggtgttcaaagaccaggacatcaagctggaggttcagcactgtggcggtata
gccaaggccctgcagctactaaaggagacaaattctactgagacccagaaacaaatcact
ggccttctatggaacctgtcctctgctgataagctgaaggcagaacttatagctacagcg
ctgcctgccctgactgagaatgtggtggtgccattcacctgctggtcagacaacagcgct
aacaacaacatacaccctgatgtcttcaacagcgccacagggtgcctgcggaacctgagc
tgtggccaacagaaggagaggcaggcaatgagagagtgccgtggcctcattgactccctc
atgggttatgtccagtcctgtgtggcggaggaaagccctgatgacaagtctgtggagaac
tgtgcatgcatcctccataacttgacctaccaactggaggacgagtctcctgagtgcttc
agcagcttccaacctgagagagaagaccaacatgggaaaaggaaaagccccacgattgga
tgcttcagcccaaagagcagcaaggctcaaaaggagttttcatttgacgcggtgcgggga
aagccagaggacagcaagccgtcaggtgtgaagtggttgtgccatcccatagccatgcag
acctacctgtctctgctgggctcgtcccagaatggtgccacactggaagcctgctgtggt
gccctgcagaacctcactgccggcaagggactggggtccagtgccatgtgtcagattctg
gttcaaaagcagggggctctgctgcacatgccccatcttttaaagtctcctaaccagagc
ctgcagaagactgccatatcccttctgggtaacatgtctcggaccagcagtttgcagacc
cccatggcaaagcagattctgcctgagctcaccagcctcgtctcctctggcccccgagag
atgggaaactctgacgaaactatagcaacagcatgcagcacattgcggagtctgatgttg
gcagacactgaggtcagcaagaagttcgtcaaaagtgaactggtgtcatcagtggctgac
ctcagcgagaacaggtctttccccaaaggtagcaaagcagcttccttgctcctctacagc
ttatggaacgataagaatttgcaaggcgtagcgaaaaagctggggatggccaaatcactt
tttgtcaatgacaacaccacagctatgcacaggtcggtgcaagttatcgagtga
DBGET
integrated database retrieval system
