Sander lucioperca (pikeperch): 116059555
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Entry
116059555 CDS
T07345
Symbol
pdgfab
Name
(RefSeq) platelet-derived growth factor alpha polypeptide b
KO
K04359
platelet-derived growth factor subunit A
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04010
MAPK signaling pathway
sluc04020
Calcium signaling pathway
sluc04510
Focal adhesion
sluc04540
Gap junction
sluc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116059555 (pdgfab)
04020 Calcium signaling pathway
116059555 (pdgfab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116059555 (pdgfab)
04540 Gap junction
116059555 (pdgfab)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116059555 (pdgfab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
sluc04052
]
116059555 (pdgfab)
00536 Glycosaminoglycan binding proteins [BR:
sluc00536
]
116059555 (pdgfab)
Cytokines and neuropeptides [BR:
sluc04052
]
Cytokines
Growth factors (RTK binding)
116059555 (pdgfab)
Glycosaminoglycan binding proteins [BR:
sluc00536
]
Heparan sulfate / Heparin
Growth factors/receptors
116059555 (pdgfab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
TraY
Motif
Other DBs
NCBI-GeneID:
116059555
NCBI-ProteinID:
XP_031168585
Ensembl:
ENSSLUG00000006869
LinkDB
All DBs
Position
21:9765998..9787148
Genome browser
AA seq
208 aa
AA seq
DB search
MRAALCYFLLWTTYLLLATSEEVEFPQELIDRLSHSEIHSISDLQRLLDIDSVGTGNNVI
EEPKHHKHHNHHKNYSRQHGYYNDLKSSQLHSRRKRSIVEEAVPAVCKTRTVIYEIPRSQ
VDPTSANFLIWPPCVEVMRCTGCCNTSNMRCHPSRKHHRTVKVAKVEYAKRRPKLKEVFV
RLEDHLECVCTSQHNVVEHSDAETVDVR
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgagagccgcactttgttacttcctgctgtggacgacgtacctgctgctggccacctct
gaggaagtggagtttccccaggagctgatagacagactgtcccacagtgaaatccacagc
atcagcgacctccagcggctactggacattgactccgtaggtacgggaaacaatgttatt
gaggagcccaagcaccacaagcaccacaaccaccataagaactactcccgccagcatggt
tactacaatgacctgaagagctctcagctccacagccgacgcaagaggagcatcgtagag
gaggcggtcccggcggtgtgtaagacacggacggtgatctacgagattcccaggagccag
gtggatcccacgtctgccaacttcttgatatggccgccatgtgtggaggtgatgcgctgc
acgggctgctgcaacacgagcaacatgcgctgtcatccttcccgcaagcaccaccgcacc
gttaaggtagcaaaggtggagtacgcgaagaggagacccaagctgaaagaggtctttgtg
cgattagaagaccacctggaatgtgtgtgcacatcacagcataatgtggtggagcactca
gatgcagaaacagtggacgtgaggtga
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