KEGG   Sander lucioperca (pikeperch): 116060255
Entry
116060255         CDS       T07345                                 
Symbol
sqstm1
Name
(RefSeq) sequestosome-1 isoform X1
  KO
K14381  sequestosome 1
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc04137  Mitophagy - animal
sluc04140  Autophagy - animal
sluc04217  Necroptosis
sluc04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    116060255 (sqstm1)
   04137 Mitophagy - animal
    116060255 (sqstm1)
  09143 Cell growth and death
   04217 Necroptosis
    116060255 (sqstm1)
   04218 Cellular senescence
    116060255 (sqstm1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sluc04131]
    116060255 (sqstm1)
   03029 Mitochondrial biogenesis [BR:sluc03029]
    116060255 (sqstm1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sluc04147]
    116060255 (sqstm1)
Membrane trafficking [BR:sluc04131]
 Autophagy
  Mitophagy
   Cargo receptors
    116060255 (sqstm1)
  Pexophagy
    116060255 (sqstm1)
  Aggrephagy
    116060255 (sqstm1)
  Xenophagy
    116060255 (sqstm1)
  ER-phagy
   ER-phagy recepters
    116060255 (sqstm1)
  Other autophagy associated proteins
   Midbophagy
    116060255 (sqstm1)
Mitochondrial biogenesis [BR:sluc03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    116060255 (sqstm1)
Exosome [BR:sluc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   116060255 (sqstm1)
SSDB
Motif
Pfam: UBA_5 ZZ PB1
Other DBs
NCBI-GeneID: 116060255
NCBI-ProteinID: XP_035862400
LinkDB
Position
1:complement(6662151..7247438)
AA seq 416 aa
MAVTVKAYLMGKDEAVREVRRFAVDQEVSSSFEYLSKKTASVFNNMKNCFNMYYRDEDGD
LVAFSSDDELMMGLACMKDATFRLYIKEKKENRRDFPLHAFPPFTFGHPPPPGAPMAPPP
HMAPPPLHGDVTCDGCEGPVVGTRFKCSVCPNYDLCSACQARGTHTEHALLPIWHPLQWF
PRGKWMKRMRHCMWNQTLNQNLNQNQDQDQDQDQDQDQDGSSRPAGDCSTPSASEANVDF
LKNIGEGVAAMLSPLGIDVDIDVEHDGKMTKVTPPSQSGGVKGDGGGASSGGGASSEGSK
VRRDSEEEWTHLSPKEVDPSTGELQSLRDQDQDQDQGQDQGQGPTSGPTGLREAALYPHL
PQEADPRLVESLSLMLSMGFTDEGGWLTRLLQAKDFDIGAALDAIQYAKQPRPHQP
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggcggtgacggtcaaggcctacctgatggggaaagacgaggcggtgagggaggtccgg
aggttcgcggtggatcaggaagtttcctccagcttcgagtacctgagcaagaaaactgcg
agtgtgtttaacaacatgaagaactgcttcaacatgtactacagagatgaagatggagac
ctcgtggccttctcctctgatgacgagctgatgatgggtctggcctgtatgaaggacgcc
accttccgtctctacatcaaagagaagaaggagaaccgtagagacttccctctccacgcc
ttccccccctttaccttcggccaccccccccctcctggagccccgatggccccgcccccc
cacatggccccgccccccctgcacggtgatgtcacctgtgacggctgcgagggccccgtg
gtgggaactcgcttcaagtgttcggtgtgtcccaactacgacctctgctcggcctgccag
gcccgcggcacgcacacggagcacgccctgctgcccatctggcaccccctgcagtggttt
cctcgggggaagtggatgaagaggatgagacactgcatgtggaaccagaccctgaaccag
aacctgaaccagaaccaggatcaggaccaggaccaggaccaggaccaggaccaggatgga
tcctccaggcccgctggtgactgcagcaccccctctgcgtccgaggccaacgtggacttc
ctgaagaacatcggcgagggcgtggcggccatgctgagcccactgggtattgacgtggac
attgacgtggaacatgacggaaagatgaccaaggtgacccctccctctcagagtgggggg
gtgaagggagacgggggcggagccagcagtgggggcggagccagcagcgaggggtcaaag
gtgcggagagactcggaggaggagtggactcacctgagccccaaagaggttgacccgtcc
accggagagctgcagtccctcagagaccaggaccaggaccaggaccagggccaggaccag
ggccagggtcccacgtccggtccaacaggcctcagggaggcggctctgtacccccacctg
ccccaagaggcggacccccgcctggtggagtctctgtctctcatgctgtcgatgggtttc
accgacgaaggcggctggctgactcggctccttcaggccaaagacttcgacatcggcgcc
gcgctggacgccatccagtacgccaaacagccccgcccacaccagccctga

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