KEGG   Sander lucioperca (pikeperch): 116061044
Entry
116061044         CDS       T07345                                 
Name
(RefSeq) breast cancer type 1 susceptibility protein homolog isoform X1
  KO
K10605  breast cancer type 1 susceptibility protein [EC:2.3.2.27]
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03440  Homologous recombination
sluc03460  Fanconi anemia pathway
sluc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    116061044
  09124 Replication and repair
   03440 Homologous recombination
    116061044
   03460 Fanconi anemia pathway
    116061044
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sluc01009]
    116061044
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sluc04121]
    116061044
   03036 Chromosome and associated proteins [BR:sluc03036]
    116061044
   03400 DNA repair and recombination proteins [BR:sluc03400]
    116061044
Enzymes [BR:sluc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116061044
Protein phosphatases and associated proteins [BR:sluc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116061044
Ubiquitin system [BR:sluc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116061044
  Multi subunit type E3
   BRCC complex
    116061044
Chromosome and associated proteins [BR:sluc03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     116061044
DNA repair and recombination proteins [BR:sluc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     116061044
    BRCA1-A complex
     116061044
    BRCA1-B complex
     116061044
    BRCA1-C complex
     116061044
    BRCA complex
     116061044
   FA (Fanconi anemia) pathway
    Downstream FA components
     116061044
SSDB
Motif
Pfam: BRCT BRCT_2 zf-C3HC4 zf-C3HC4_4 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_3 RTT107_BRCT_5 RING_XB3-XBAT31 zf-RING_2 zf-Nse zf-RING_5 zf-RING_4 zf-MIZ zf-ANAPC11 zf-RING_10 TRAF3_RING PTCB-BRCT YicC-like_C Baculo_IE-1 Prok-RING_4 zf-rbx1 zf-PARP
Other DBs
NCBI-GeneID: 116061044
NCBI-ProteinID: XP_031170779
LinkDB
Position
22:15884345..15906264
AA seq 1455 aa
MTMKTPMAIDVKKGISVLWETLQCPICLDLMTAPVSTNCDHQFCKFCMMKLLDNTKQNRA
TCPVCKTKITKRSLQESPGFQRLVTGLQDMIQAYEHDTGTNYLTGMSQQKGQSGVTDAEA
AEHCHDMSFGNTPGNVEIVDNDDLSRSHSSTIAAQNGFARLMELEDTSPLTTENEGLDSG
LGEAPPTSDKRMHSPTDNMEPVETEMSQVVKIATSIHKTRGNKRFHKLEKASLCASLIPD
ETEHQPLRKSSRKKQKTDLESDKILKEKQKKSLEKVAEWLMTVPTEGSLELEKPNEDTDD
SDSCSSTSTIDVKQHNSNVNPGRVDRAKALEEQVFGAVYKRERRGSRVVSPPFNVFVEPS
TTKETQTVSKRRKNTLTPADFFKKTGSEDKSASDMEEEQQRLEEVNDTSSDIFKEADHIE
AMKKNDIDKYEEESNNFPESDKKNGKDEVSCPVFDIDQQLTDRKSKKSTRNSLQQVDSDL
QEQAKANSESTEQKKTDKRKGKNMRLEKAKPARVPKPLVLVGVKNGEASPMTRPRSGEVQ
VHIENYPSSEDQETPVVSSTRRSRRLQLFTEEIQEGHKKANLKANKAEKNGNVGKQSEEA
KDGTLDNMASPSTNENMTKVAERNGCIYDQDIEEIENMESDERTSYMRPTEDVKKSLTEV
PNAETLSEASAACYVTVVPSSTSPTEAAVVDPTLERDNPTNHLPNNIQLENEEDNNDSEL
DTEQLLKSFKAIKRKSFHLGGSNLKRSRGLDQENLQGAKAQENQRLCSGVEPVKNQMYTK
ASELTNQEALGDNKNSSCSDLISPSFSPAPTRKPVVEKPDQMVVEASIPGSSQDSAGGIG
VSNSVSSALTPNKVSKREIESPHVSVVSQVVDSGLCFTAAEREEPNETSNYSQITEKQLD
STERGAGRGREIRDSISVCHSAAIGIHSVNTAEHVLNAECSLTPDGLGIPVVQIVHEAQS
DSHGSGELSANSSINSMPRKRTRAQRLDSSLESDCSEEGLPTLTDIFGTSALPSAVTKEL
EGSSEANRCEDATVCGAKQLSRPPACPSPDCVNSSQASVDLFGTPDECDVPVNDVSVPSQ
IESSQFSSEVLVTQQKIEMQKELVRLEKLMALVTEVLQEKEGSPAKEVSLKTIQSSKTTG
PDAHIPLPCDQDRGQGSDWKAVPEVEREPSTRPSDGKEVIQPSGSKHGSTAEMAVQRSTH
TGQSVKGTGASKTPSSSSAAKTLKSNGSPSDGQEDKENNTPPRDRSKAKMVLVSSGLGPN
EQIMVKRFAKRVGARVVSQVTSEVTHIIMHTDEQLVCERTLKYFLGIAGRKWVVSFQWIS
ECFKLKKLLDESVFEVRGDVVNGPSHQGPMRARTTEDNNLLLKGYTICFQGPFADMTTDE
MEWMVELCGAAVVKDPLLLDSKQKSHQLVIVQPGSESSSSSTYSSLSRQATVVTRGWLLD
TVATYTLQNYNKYTT
NT seq 4368 nt   +upstreamnt  +downstreamnt
atgaccatgaaaaccccaatggccattgatgtcaaaaaggggatttcagtcctttgggag
actctgcagtgtcccatatgcttggatttaatgactgcacctgtatctactaactgtgac
catcagttttgcaaattttgtatgatgaaacttttggacaacaccaaacaaaacagggct
acttgtccagtgtgtaaaaccaagataaccaaaaggagcttgcaggagagccctgggttt
cagagacttgtaacaggactgcaggacatgatacaggcatatgaacatgacactggcaca
aactacttaactggaatgtcccagcaaaaaggacaatcgggagtcacagatgctgaagct
gctgaacattgtcatgatatgtcatttggaaatacacctggcaatgtggaaattgtcgac
aatgatgatctttcaaggtctcactcctcgactatagcagcccagaatggatttgcaaga
ctgatggaacttgaagacacaagtcctttgacgacagaaaatgaaggcctggacagtggt
cttggggaggccccaccaacgtctgacaaaagaatgcacagccctacagataatatggaa
ccagtagaaacagaaatgtctcaagttgtgaaaatagcaacatcaatacacaaaactaga
ggcaataagcgtttccacaaattggagaaagcctccctttgtgcatcattaattccagac
gagaccgaacaccaacctttaagaaaatcatcaaggaagaagcagaaaacagatttggag
tctgacaagattcttaaggagaaacagaagaaaagtctagagaaagttgctgaatggctc
atgaccgttccaactgaaggaagtcttgagttagagaaacccaacgaagacaccgatgac
tcggacagctgttcttccacttcaacaatagatgtcaagcaacacaacagtaatgtgaat
cctgggagagtggatcgtgctaaagcccttgaagagcaggtgtttggggccgtctacaaa
cgagagcgaagaggaagcagggttgtctctcctccatttaatgtttttgtcgagccatca
acaaccaaagaaacacaaactgtctccaaaagaaggaagaacactctcactcctgctgat
tttttcaagaaaacaggctctgaagataaaagtgcaagtgacatggaggaagagcaacaa
aggttagaagaagtaaatgacaccagcagtgacatttttaaagaagcagaccacatcgag
gccatgaagaaaaatgatatagacaaatatgaggaagagtcaaacaactttccggaaagt
gacaaaaagaatggcaaagatgaggtttcctgtcccgtgtttgatattgatcaacagcta
acagacagaaagtcaaagaaaagtacgcgaaacagtctgcagcaggttgacagtgatttg
caagagcaagctaaggcaaattcagaaagtactgagcaaaagaaaactgacaagaggaaa
ggtaaaaacatgaggttggaaaaagccaagcctgctagagttccgaaaccccttgttctg
gttggagttaaaaatggagaagctagtcctatgactagaccaaggtcaggagaagttcaa
gttcatattgagaattaccctagcagcgaagaccaagaaacccctgtcgtgagcagcacg
aggagaagtagaagacttcaacttttcactgaagaaatccaagaaggtcacaagaaagca
aacttgaaagccaataaagctgaaaaaaacggcaatgttggaaagcaatctgaggaagct
aaagatggaacattggataatatggcatcgccatccacgaatgaaaacatgacaaaggtg
gctgaaagaaacggatgtatttatgatcaagatatagaagaaatagaaaacatggagtct
gatgagagaacatcttatatgagaccaaccgaagatgttaaaaagtcccttaccgaagtg
ccaaatgctgaaaccttgtctgaagctagtgctgcatgttatgtcactgttgtcccaagc
tctacaagtccaactgaagcagctgtggtcgatccaacacttgaaagagacaatccaaca
aatcatctcccaaacaatattcagttggaaaatgaggaggataataatgacagtgaactg
gacacagagcaacttctcaagagcttcaaagccattaaaaggaagtctttccatcttggc
ggttcaaatttgaaaaggagccgtggtttagaccaagaaaacttgcagggtgccaaagca
caggaaaaccagcgtctttgttctggtgttgaaccagtgaaaaatcagatgtacacaaag
gcatctgaactcaccaaccaagaggcattaggagacaataaaaactcatcttgcagtgat
ttgatatccccttccttttcacccgccccgacaagaaaaccagttgttgagaaaccagat
caaatggtggtagaagcctcgatccctggtagcagtcaggacagcgctggtggtatcggt
gtctccaatagtgtcagcagcgccctcactccaaataaagtttcaaaacgtgaaatagaa
agtcctcatgtttctgttgtgtctcaagtagtcgattctggactctgcttcacagccgct
gaacgcgaggagccaaacgaaacctcaaattattctcaaatcacagagaaacagcttgat
tctaccgagaggggtgccggcagaggaagggagataagagacagcatttcggtgtgccat
tcagctgctattggaatacattcagtcaacactgctgaacatgttttaaacgcagagtgc
tctttaactcctgatggccttggaatacctgttgtacaaattgtccacgaagcacagtca
gacagccatggtagtggagagctcagtgccaattcttccatcaatagcatgcccaggaag
aggacaagggcccagaggctcgactcttcattggaatcagactgcagcgaagagggatta
ccaactttgacagacatttttggaacatcagctcttccctctgcggtgacaaaggagctg
gaaggctccagtgaagctaatagatgtgaggatgctacagtttgtggagcaaaacagttg
agccgtccacctgcatgccccagccctgactgtgttaattccagccaagcatctgtggac
ttatttggaacgccagatgaatgtgatgtcccagtaaatgacgtcagcgttccctcacaa
atcgaatcatcacaattttcaagcgaagtccttgttacacagcaaaaaatagaaatgcag
aaggagctggtgagattggagaagttgatggctctggtgacggaggtgcttcaggaaaaa
gaaggcagtcctgcaaaagaagtctccttaaaaacaattcagagcagcaaaaccacaggc
ccagacgctcacatacccctcccctgtgaccaggacagaggccaaggttcagactggaaa
gctgttccagaagtagagcgagagcccagcacaagaccatctgatggcaaagaggtcatc
cagcccagtgggtcaaagcatggcagcactgcagagatggcagtgcagcgctccacacac
acggggcagagtgttaaaggcaccggagcctccaaaactcctagttcaagttcagcagcc
aaaacattaaagagcaatgggtcaccatcagatgggcaagaagacaaagaaaataacact
ccaccgagagacagaagtaaagctaagatggtgctagtgtcatctggattaggccccaat
gaacagataatggtcaaaaggtttgccaagcgagttggtgcccgtgtggtttcccaggta
acgtcggaggtgacccatatcataatgcacacagatgaacaactggtatgtgagcgcacg
ctgaagtacttccttggcattgcaggcaggaagtgggtggtgagcttccagtggatttca
gagtgcttcaaactaaagaaactcttagatgagagtgtctttgaagtgagaggtgacgtg
gtgaatggacccagccaccagggccccatgagagctcgtaccactgaagacaataacttg
ctcctgaagggctacacgatctgtttccaagggccttttgcagacatgactacagatgaa
atggagtggatggtggagctctgtggagcagctgtagtcaaagatcctcttctcctcgac
agtaaacagaagtcccatcagctggtcattgtacagcctggatcagagtcgtcatcgtcg
tccacatacagcagtctttctagacaagctacagtcgtgacacgcggttggctgttggat
accgtggcaacctacaccctccaaaactacaacaagtacacaacatag

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