Sander lucioperca (pikeperch): 116061517
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Entry
116061517 CDS
T07345
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116061517 (scn4aa)
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116061517 (scn4aa)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
116061517
NCBI-ProteinID:
XP_035853707
Ensembl:
ENSSLUG00000022285
LinkDB
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Position
22:22063279..22089858
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AA seq
1921 aa
AA seq
DB search
MAPLLPRRGTDAFRRFTKESLAEIKRLKDERKKAAEVEVHKVVEGHKEEEPPAPNADLEA
GKSLPMIYGDPPSELLNTPLEDLDPFYEDQHTFIVITKGNTIYRFNAEPACYILSPFSLV
RRGAIKILIHSLFSLFIMITILSNCVFMTLSNPPAWSKTVEYVFTGIYTTEATIKVLSRG
FCVGSFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIV
AALIQSVKKMVDVMILTVFALAVFALVGLQLFMGNLRQKCVRWPIQPNETAFELFNSTAT
FNNTMSFNNTMGVNHTTYSNGTFNFNEYIENSENHYFLEGSLDALLCGNSSDAGKCPEGY
TCMKAGRNPNFGYTSFDSFGWAFLALFRLMTQDYWENLFQLILRAAGKTYMLFFVVIIFL
GSFYLINLILAVVAMAYEEQNQATQREAIEKEEEFQRLLEQFKNQDEQAKGLGSQITLTS
KKSLSHHTIFDMTDDERSLGHDEIIKDCNGRIIPRLLIRAPTMVKSAADYELREKSLGSA
HSRLNLEEPGLTKMTASALSVLTAAAIEELEEAQRPCPPGWYKFADMFLKWDCCPQWVFF
KKWMHFVVMDPFVDLGITICIVLNTLFMAMEHYPMTPEFEYMLSVGNLVFTGIFTAEMFF
KLMAMDPYYYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLN
MLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYKECVCKISVDCELPRWHMNDF
FHSFLIVFRILCGEWIETMWDCMEVAGAGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSG
DNLSTGDDDGEMNNLQIAIGRITRGIDWFKAFIVQTVLQILGRKPKEPEEGPTDDEDPKT
EAIEMNHLDTSQDFKMADGIPNCLVEGRPSGFIVDGELSLNVPIAQGESDFENLGGDDDD
DDDDDDDDDDDDDDEDDADCADDSEISDEINNLHYSENLEDESNLLGKGKLMGALNDGDS
SVCSTVDYQPPEPEPEEVEEEEPDPVEPEACFTDNCVKRWPCLTVDITQGKGKKWWNLRR
TCFTIVEHDWFETFIVFMILLSSGALAFEDIYIERRRTIKIILEFADKVFTYIFIIEMLL
KWVAYGFKTYFTNAWCWLDFFIVDISLISLAANWMGYAELGPIKSLRTLRALRPLRALSR
FEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELFPITE
VNNRSDCMAVKEATKEARWVNVKVNYDNVGLGYLSLLQVSTFKGWMDIMYAAVDSREVEE
QPSYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDKDIFMTEEQKKYYE
AMKKLGSKKPQKPIPRPTNPIQGLVFDFISQQFFDIFIMVLICLNMVTMMVETDDQSAEK
EDFLFKVNVAFIVVFTGECVLKLFALRQYYFTNGWNVFDFVVVILSIAGTMLSDIIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGM
SNFAYVKKQAGIDDVFNFETFGGSIICLFEITTSAGWDGLLLPMLSNEFPDCDPDFENPG
TDVKGNCGNPVMSMTFFCSYIIVTFLVVVNMYIAIILENFNVAQEESGDALCEDDFEMFN
ETWEKFDLDGSQFIEYRQLSDFCDTLQPPLRVAKPNRLRLIEMDLPLVIGDRIHCLDVLM
AVTQMVLGDTVEMAAMRLSIEAKFILSNPTSDSFAPITTTVRHKEEQMAVVVIQRAYRNH
LLKRCIRHAAFMHRCKRVGRKDEGEDPPEKEGMLARRMGVLYGSNVDLAGEMEQADLETL
ASQQPPNPETLSHYTEAQCCPEPPEPNIIVVPVEITNEVLLHSAPNPHLFILHANLRETI
V
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccctgctccctcgccgaggcaccgatgcgttccgccgcttcaccaaggaatcg
ctggcggagatcaagaggctcaaggatgaaagaaaaaaggctgcagaagtagaggtccac
aaggtggtagagggccacaaggaggaggagccaccggccccaaacgctgatctggaggcg
ggcaagagtctgcccatgatctacggagaccctccatcagagctgctcaacacacctctg
gaggacctggaccccttctacgaagaccagcacacattcattgtgatcactaaaggaaac
acaatctacaggttcaacgctgaaccggcttgctacattctgagcccctttagtttggtt
agaagaggagccatcaaaattctcatacattcattatttagcctgttcatcatgattacg
attctatcgaattgtgtattcatgacgctgagcaacccaccagcatggagtaaaactgtt
gagtatgtttttactggtatctataccactgaggcaacaatcaaagtgttgtcaagaggt
ttctgtgttgggtcttttacattccttcgagatccatggaattggctggatttcatggtg
atcagcatggcatacgtcactgagtttgttgaccttggcaacgtgtcagctctcaggacc
tttcgtgtacttcgagcccttaaaacaattactgtgattcctggtttgaaaaccatcgtg
gccgccttgatccagtcagtgaagaaaatggtggacgtcatgatcctgaccgtctttgcc
ctcgctgtgtttgccctcgttggccttcagctctttatgggaaatctgcgtcagaagtgt
gtgcgatggcccatccaaccaaatgaaacggcatttgaattatttaactccaccgccact
tttaacaacaccatgtctttcaacaacaccatgggcgtcaatcatacaacatattccaac
ggcaccttcaatttcaatgagtatattgagaactcggagaatcactattttttggaaggc
agtctagatgctctactttgtggaaacagctctgatgctggaaagtgcccagaaggatac
acgtgcatgaaggctgggaggaaccccaactttggctacacgagttttgactcgtttggc
tgggccttcctggccctcttcagactcatgacgcaggactactgggagaaccttttccag
ctgatccttcgggcagctggtaagacatacatgctattctttgtggtgattatctttctg
ggctccttctacctcatcaacctcatcctggctgtggtagccatggcttatgaagaacag
aatcaggcaactcagcgagaggccatcgagaaagaggaagagttccagcggctactagag
caattcaagaatcaagatgagcaggcaaaaggtcttgggagccaaatcactctaaccagt
aagaagtcgctcagtcatcacaccatatttgatatgacggatgatgaacgaagccttgga
catgatgaaattatcaaggattgtaacgggagaatcattccccgtctgttaatcagagca
cccaccatggtcaagtctgctgcagattacgaactccgagaaaagtcattaggctcggcg
cacagcaggcttaatctggaagaaccaggcctgacaaagatgactgctagtgctctgtct
gtgctcactgcagctgctatagaagagttggaggaggctcagaggccgtgcccacccggc
tggtacaagtttgcagacatgttcctgaagtgggactgctgcccgcaatgggtgttcttc
aaaaagtggatgcactttgtggtgatggacccttttgtcgacttgggcatcaccatctgc
atcgtgctcaacaccctcttcatggccatggagcactaccccatgaccccagagtttgaa
tacatgctctcagtggggaatctggttttcaccgggatcttcacagcggagatgttcttc
aagctgatggccatggatccctactactactttcaagttggctggaacattttcgacagc
atcatcgtcactctcagtctggtggagttggggctggcaaatgtccagggcctgtctgtc
ctcaggtccttccgtctgcttcgtgtcttcaaactagcaaagtcctggcccacgctcaac
atgctgatcaaaattattggtaactcagtaggagctttaggaaacctgactttggtgctg
gccatcattgtcttcatcttcgccgtggtgggtatgcagctctttggcaagaactacaag
gaatgcgtgtgcaagatctccgtagactgcgagctgccgcgctggcacatgaacgacttc
ttccactcgttcctcatcgtgttccgcatcctgtgcggggagtggatcgagaccatgtgg
gactgcatggaggtggctggagctgggatgtgtttagtcgtcttcatgatggttatggtc
atcggaaatctagtggtgttgaacctcttcctggccttgctgctcagctcgttcagcgga
gacaacctctccacgggggacgacgacggagagatgaacaatctccagattgccattggc
aggatcacacgaggcatcgactggttcaaagcgttcatcgttcaaactgtcctgcagatt
ctgggcagaaagcccaaagagcccgaggagggtccgacggacgacgaggaccctaaaaca
gaggcaattgaaatgaaccacttggacacaagtcaggatttcaaaatggcagatgggata
cccaattgtttggttgaaggccggccttctggatttattgtggatggagagctcagtctc
aatgtgccaatcgctcagggagagtcagactttgaaaacctgggtggtgatgatgatgat
gatgatgatgatgatgatgatgatgatgatgatgatgatgatgaagatgatgctgattgt
gctgatgactcagagatttcagatgagataaataatctgcattactcggaaaacttagaa
gatgaaagtaacttgctgggaaaaggcaaactgatgggtgctttgaatgatggggattct
tcagtgtgtagcacagtggactatcaaccacctgagcctgaaccagaagaagtggaagaa
gaagagccagacccagtggagccagaggcctgcttcactgacaactgtgtgaagcgctgg
ccgtgtctgactgtggacatcacccaaggtaaaggcaagaaatggtggaacctccgtagg
acttgcttcactattgtggagcatgactggtttgaaaccttcatagtctttatgatcctc
ctcagcagcggagctctggcctttgaagacatatacatagaaaggcgccgaacaatcaaa
attattctggagtttgctgacaaagttttcacctacatctttatcatcgagatgctcctt
aaatgggtcgcatacggcttcaagacctacttcaccaacgcttggtgttggttagacttt
ttcattgtagatatttccctgataagtttagctgccaactggatgggatacgctgagctt
ggaccaatcaaatccctcaggactctcagggcactaaggcctcttcgagcgctgtcaaga
tttgaagggatgagggtggtggtgaatgctctcgttggagcgattccttccatcttcaac
gtgctgctggtgtgtctgatcttctggctcatcttcagcatcatgggagttaacctgttt
gccgggaagttctaccgctgcatcaacaccaccacagaggagctgttccccattacggag
gtcaacaaccggagcgactgcatggctgtcaaagaggccacgaaggaagcccgatgggtc
aacgtcaaagtcaactatgacaatgtgggactaggctatctgtcactgcttcaagtgtca
acttttaaaggctggatggacatcatgtatgctgccgttgactcaagagaggtagaggag
caaccttcttatgagatcaacctctacatgtacatttactttgtcatcttcatcatcttt
ggctctttcttcacactcaacctcttcattggtgtcattattgacaatttcaaccaacaa
aagaaaaagtttggagataaagacatcttcatgactgaggaacaaaaaaagtactatgaa
gccatgaagaaacttggctccaagaagccacagaagccgattccacgtccaacgaaccca
atccaggggttggtgtttgacttcatcagtcagcagttctttgacatcttcatcatggtg
ctcatctgcctcaacatggtgaccatgatggtggagacggacgaccagagcgcagagaag
gaagatttcctctttaaagtaaacgtggctttcattgtcgtcttcaccggagagtgtgtg
ttgaagctctttgccctgcggcaatactacttcaccaacggatggaacgtttttgatttt
gttgtggtcatcttgtccatagctggtacaatgctctcagacataatcgagaagtacttt
gtgtcacccactctgttcagagtgatcagactggccagaataggcaggattctgagactt
atcaaaggagcgaagggcattcggacgcttctcttcgctctaatgatgtcacttcctgcc
ctgttcaatattggcctcctgctcttcctcgttatgttcatcttctccatatttggcatg
tcaaactttgcctatgtcaagaagcaggctggaatcgatgatgtatttaactttgagaca
tttgggggcagcattatctgcttgtttgagatcacaacatcagccggctgggatggactt
ttacttccaatgctgagcaatgagtttccagactgtgatccagactttgagaacccaggc
acggatgtaaagggtaactgcggcaatccggtcatgagcatgacattcttctgcagctac
attatcgtcacatttttagtagtggtcaacatgtatatcgccatcatcttggagaacttc
aatgtggcgcaggaagagagcggtgatgcactctgcgaggacgactttgagatgttcaat
gagacttgggagaagtttgacttagatggatctcagttcattgagtatcgccagctctca
gatttctgtgataccttgcagccgccgctgagggttgccaagcccaatcggcttcgcctg
attgaaatggatctgcccctggtcattggggacaggatccactgcctggatgtcttgatg
gccgtcacacagatggtcttgggagacacagtggagatggcggcaatgcggctgagcatc
gaggccaagttcatcctgagcaaccccacctcagactcctttgcaccaattacgacaacg
gtgcgccacaaagaagagcagatggctgttgtagtcattcagagggcttaccgcaaccac
ctgctgaaacgctgcatacgccacgccgcttttatgcaccgctgtaagagggtgggtaga
aaggatgaaggtgaagacccaccagagaaagagggtatgctcgcacgaaggatgggagtg
ctctatgggagcaatgtggaccttgcaggggagatggagcaggctgatttagaaactcta
gcaagccaacagcctcctaatcccgagacattgtcacattacacagaggcccagtgctgt
ccagaaccccccgagccaaatatcattgttgtacctgtagaaattactaatgaggtttta
ttacattctgcccccaacccacacctctttatcctacatgcaaatctgagagagacgatt
gtataa
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